Lolium rigidum (rigid ryegrass): 124706959
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Entry
124706959 CDS
T09103
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124706959
Transcription machinery [BR:
lrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
124706959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
124706959
NCBI-ProteinID:
XP_047094575
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All DBs
Position
4:complement(210153281..210155446)
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AA seq
485 aa
AA seq
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MTSTVTTPSRPLPAGSQRRRYRPTVLAIAGAGKPRRRRAPAAATSCSALASKQSTAAAKL
LPPAEVEEAAAGISTDYNEVAAALETLYQLSPTLVEDEQLDQTKKATKKKRKVRKKAAAK
TTIPIRKVVVKSQRPRRMDLGKRVEMREAAGKEEVGEERGFEEALLREHAVSTDMGSLDW
RRMKIPPVLTSAQSARLFKIVQPMKAILKVHENLQNELEREPTDVEVAEAMNMPVQRLRR
CREVGRAARNKLIKHNLRLVLYAINKYYPDMTGDERFADLCQAGANGLITAIDRFDPKRG
FRISTYALFWIRHSVVRAMTLSSFTRFPFAMESERQEVNRAREELSFELGRAPTDEETMK
KVGLSPARYRDVVRMTRPTYSLHSRNRVTQEELINEVTDGDAIGVDTHKHNRLLRLAIDD
LLDSLKPKESVVIRQRFGLDGRGRRTLSEIAGNLRISREMVRKYELKALMKLKHPTRVDY
LRRYM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgaccacgccgagccggccgctcccggcggggagccagcgccggcgg
tacaggccaacggtgctcgccatcgccggcgccggcaagccgcgccggcgccgcgctccg
gccgccgccaccagctgctccgcgctcgcgtccaagcagagcacggccgcggccaagctc
cttcctcctgcggaggtggaggaggcggcggccgggatcagcacggattacaacgaggta
gccgccgcgctggagacgctgtaccagttgagcccaaccctggtggaagacgagcaactg
gaccagaccaagaaggccaccaagaagaagaggaaggtgaggaagaaggcggcggccaag
acgacgatcccgataaggaaggtggtggtgaagagccagcggccgcgacgaatggatctg
gggaagagggtggagatgagggaggccgccggcaaggaggaggtgggcgaagagcgcggg
ttcgaggaggcgctgctgagggagcacgccgtgtccacggacatgggcagcctcgactgg
aggcggatgaagatcccgcctgtgctcacctccgcgcagagcgcccggctcttcaagatc
gtgcagcccatgaaggcgattttgaaggtgcacgagaacctgcagaacgaactggagagg
gagccgacggacgtcgaggttgccgaggccatgaacatgccggttcagcggctgcggcgg
tgccgcgaggtcggacgggcagccaggaacaagctaatcaagcataacctgcgtctggtg
ctgtacgcgatcaacaagtactacccggacatgaccggcgacgagcggttcgccgacctg
tgccaggccggcgccaacgggctcatcacggcaatcgaccgcttcgaccccaagcgcggc
ttccgcatctccacctacgcgctcttctggatccgccactccgtcgtccgcgccatgacg
ctctccagcttcacccgcttccccttcgccatggaatcggagaggcaggaggtcaacagg
gcgagggaggagctgtccttcgagctcggcagggcgccgacggacgaggagacgatgaag
aaagtggggctgtctccggcgaggtaccgcgacgtggtgcggatgacgagaccgacctac
tcgctccactcgcggaaccgtgtcacgcaggaggagctcatcaacgaggtcaccgacggc
gacgccatcggggtcgacacccacaagcacaaccgcctcctccgcctcgccatcgacgac
ctcctcgattcgctgaagcccaaggagagcgtggtcatccggcagaggtttgggctggat
ggtagggggaggcgaacactgagcgagatcgccggaaacctgagaatctccagagaaatg
gtgcgcaagtacgagctcaaggcgctcatgaagctcaagcaccccacccgggtcgactac
ctcagaagatacatgtga
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