Lolium rigidum (rigid ryegrass): 124707236
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Entry
124707236 CDS
T09103
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
124707236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lrd03011
]
124707236
Ribosome [BR:
lrd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
124707236
Bacteria
124707236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
124707236
NCBI-ProteinID:
XP_047094859
LinkDB
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Position
4:complement(230691534..230705989)
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AA seq
506 aa
AA seq
DB search
MPPPSLLSLLPAASVSPRTRRRRAPDASPRLHSRLSVRTARAPSPLRALPSSDVGVGGGD
GGGEELHLLDKPFPSASSEAEDEREPAPAPSTEQVLASYLNFFQLKGADASEDTESNPNA
AVTFLEDDAGASAGGGGGGVVYYDPRPGDLVVGVVVGGDARALDVDVGAGGEPALMLAKE
AAPTSPDEFGYLACDLASSEFAAEGRVGVAVGGGGVGGKVRRAGKGKCAPVVGVGTVVFA
EVLGRTLGGRPLLSARRLFRRVAWHRVRQMKQLNAPIKVKIFEWNAGGLLTRIEGLRAFL
PKPEMMSRPRNFTDLKNSVGRQIHVCIRKIDERSNELIISEKEAWAILYLSEGALLEGTV
RKLFPYGAQIRIGETNRSGLLHVSKITHGQVRSVSDVLQVGERVKALVIKSSAPDRIALS
TKDLESEPGLFLSDKEKVFAEAEEMARRYRDQMPVSPLSAEPGSSCSDDHGVPFEDEEES
YANWKWLKFIKSDRVGCSPRSTEPGL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccctccctcctctccctcctccccgccgcctccgtctccccgcgcacccgc
cgccgccgagcccctgacgcgagcccccgcctccattcccgcctctccgtccgcacggca
cgggctccctcgccgctccgtgcgttaccctcctccgatgtgggcgtcggcggcggggat
ggagggggcgaggagctgcacctgctcgacaagccgttcccgtccgcctcctccgaagcg
gaggacgagcgcgagccggctccagcgccgtccacggaacaagtgctcgcctcctacctc
aacttcttccagctgaagggcgccgacgccagcgaggacacggaatccaaccccaacgcc
gccgtgaccttcctagaggacgacgctggcgctagcgcgggcggcggcgggggcggggtc
gtctactacgaccccaggcccggggacctggtggtgggcgtggtcgtcgggggcgacgcg
agggcgctcgacgtcgacgtcggcgccgggggcgagccggcgctgatgctggccaaggag
gcggcgcccacgtccccggacgagttcggctacctggcgtgcgacctcgcgtcgagcgag
ttcgccgcggaaggcagggtcggcgtggcggtcggcggcggcggcgtgggagggaaggtc
cggagggccgggaaggggaagtgcgcgccggtggtgggcgtcggcacggtggtgttcgcg
gaggtcctcggccggacgcttggcgggcggccgctgctgtctgcgcgcaggctgttccgg
cgcgtcgcgtggcacagagtgaggcagatgaagcagcttaatgcacctatcaaggttaaa
attttcgagtggaatgctggaggcttgctgacaagaattgaggggctccgggcatttctc
cctaagcctgagatgatgtctagaccaagaaactttacagatctgaagaacagtgttggt
cgacagatccatgtctgtattaggaagattgatgaaaggagtaacgaattaataattagt
gaaaaagaggcgtgggcaatattgtaccttagtgaaggggctctcttggaagggacagtc
cgcaaattgtttccatacggtgcacaaattaggattggcgagactaacagaagtggtttg
ctgcatgtctcaaagataacacatggccaggtgagatccgtcagtgatgtgcttcaagtg
ggcgaaagagtgaaggctcttgtgattaaatcatcggcaccagacagaattgcgcttagt
acgaaggaccttgagagcgagcctggactgtttctctctgacaaagagaaggtgtttgct
gaggctgaagagatggcgcggcgataccgggatcagatgccggtgtcgcctctgtccgcc
gagcctggctcctcgtgcagcgatgaccatggtgtcccgtttgaggacgaagaggagtcg
tacgcgaactggaagtggttgaaattcatcaagtctgacagagtaggatgtagccctcgt
agtaccgaaccaggattgtaa
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