Lolium rigidum (rigid ryegrass): 124707342
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Entry
124707342 CDS
T09103
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124707342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124707342
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124707342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
Motif
Other DBs
NCBI-GeneID:
124707342
NCBI-ProteinID:
XP_047094953
LinkDB
All DBs
Position
4:238193752..238198403
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AA seq
264 aa
AA seq
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MGDEAAKHLETARADRSVWLMKCPPVVSQAWQGASSSSGEANPNPVVAKVVLSLNPLSAA
EPTLQFKMEMAQTRETSTCNLPKSYSLNMFKDFVPMCVFSENGQGKHSCEGKVEHKFDME
PHKDNLLNYAKLCRERTQKSMVKTRKVQVLDNDHGMSMRPMPGMVGLITSGSKEKRKPTP
TKPSDVKRTRRDRRELENIIFKLFEKQPNWALKALVQETDQPEQFLKEILNDLCMYNKRG
PNQGTHELKPEYKKSSEEAAADAS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaggcggcgaagcacctggagacggcgcgggccgaccgctccgtgtggctc
atgaagtgccccccggtcgtctcccaagcttggcagggcgcctcctcgtcctccggcgaa
gctaaccctaacccggttgtcgccaaggtcgtgctgtccctcaaccccctcagcgccgcc
gagcccaccctccagttcaagatggagatggctcaaacaagggaaactagcacttgcaat
ttgccaaagagttactcgttgaatatgttcaaggatttcgtacccatgtgtgttttttct
gagaatggtcaaggaaaacactcgtgtgaaggaaaagtagagcataagtttgacatggag
cctcacaaggataatttattaaactacgcaaagttatgccgtgaaagaacacaaaagtcc
atggtcaaaactagaaaagtgcaggtacttgataacgaccacggaatgagcatgagaccc
atgcctggcatggttggtctgataacttccggttccaaggagaagaggaagccgacacca
accaaaccatctgacgtcaagaggacacgtagggatcgccgggagctggagaatatcatc
ttcaagcttttcgaaaagcagcctaactgggcactgaaggcactagtgcaagaaactgac
cagccagagcaattcctgaaggagatattgaacgatctgtgtatgtacaacaaacgaggg
ccgaaccagggaacccacgagctcaagcccgagtacaagaaatcgtcagaggaagccgct
gccgatgcttcgtga
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