Lolium rigidum (rigid ryegrass): 124707344
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Entry
124707344 CDS
T09103
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124707344
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124707344
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124707344
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124707344
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124707344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
GerD
Motif
Other DBs
NCBI-GeneID:
124707344
NCBI-ProteinID:
XP_047094957
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All DBs
Position
4:238283595..238290053
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AA seq
643 aa
AA seq
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MAPTAEPPAPPPPRRPRSGPPPGLKNLGNTCYLNSVVQCLASTPPLANFCLSSRHSNLCK
KVFPNKDKECPFCVLEWQVARLLRAEAGAVDSPGKIIRCLPLFAEHFRRGRQEDAHEFLR
YVIDACHMACLRIRKRLPAASANGDCGPEEGRGLGACMLMRETFGGALLSQVKCLVCKGE
SNKTDEIMDISLDLLGTSSVGDALACFFRPEILEGANKYSCERCKKLTSARKQMFIVKAP
KVLVIQLKRFEGINGGKINRNIEFKEGLVLSNFMYNKTQDSQPVYNLFGSIVHSGFSPDS
GHYYAYVKDTFGRWYCCNDSHVSLSSSQEVLSEKVYILFYMLSSKTQKHSTNGYSSSAVK
SSNANGNGLSSATCSEALKLPLVKSNGTCSTKGIAPVPLTNGKIAPGLHIKPIHLKNSGA
EKVASNGKQHLALKNKAEVNGAITPVQSNGCETEKSAEPSKTHGNDITCDKMDIGSQKML
QDADGNGHPVHFTDLQETSGVVATCAEKPFSVVSSTLDKDICTPENSKSSVLQQGVSAAV
KEVATSVKDSTCVKHHLDEGKFKEMLAESASSELRSSVWADDVCNFMRSAKRQCIQKTDT
PVDSDAIRKQLISDSGRVFRSKIPELLREDLIQSLRSYFEEKF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaccgcggagccgccggccccgccgccgccgcggcgcccgcgctcgggcccg
cccccggggctgaagaacctcggcaacacctgctacctcaacagcgtggtccagtgcctc
gcctccaccccgcccctcgccaacttctgcctctcctcccgccactccaatctatgcaaa
aaggtgttcccgaacaaggacaaggagtgcccattctgcgtgctcgagtggcaggttgcg
cggctgctccgggcggaggcaggggcggtggactcgccggggaagatcatccgctgcctg
ccgctcttcgccgagcacttccggcgggggcgccaggaggacgcgcacgagttcctgcgc
tacgtcatcgatgcttgccacatggcttgcctccgcatacgcaagcgcctccctgcggca
agtgccaacggagactgtggcccggaggagggccggggtctgggggcctgtatgttgatg
agggagacatttggcggggcgctgctcagccaggtgaagtgcctcgtgtgcaagggggaa
tcaaacaagaccgacgagatcatggacatcagcctcgacctgctcgggaccagctctgtt
ggtgatgcccttgcctgcttcttccggcctgagatattggagggtgcaaacaagtacagt
tgcgaaagatgcaagaagctcacctcagcgcggaagcaaatgttcatagtcaaagcacct
aaggtgcttgtcatacaactaaagaggttcgagggaataaatggtgggaagatcaatagg
aatatagagttcaaggaaggcctcgttctttccaacttcatgtataacaaaactcaggat
tcacagccggtatataatctttttggcagtattgtccattcagggttctccccagattct
ggtcactactatgcatatgttaaggatacttttggtcgctggtattgttgtaatgattct
catgtctccctctcaagctctcaggaagttttgtctgagaaggtctatatcctattctat
atgctgagttccaaaactcaaaaacatagtacaaatggttactcttctagtgcagttaaa
tcttccaacgccaatggaaatggcttatcaagtgctacatgtagtgaggccctgaagcta
ccattagtgaagtcgaacgggacatgctctactaaaggtattgcgccggtacccctgacc
aatggcaagattgcaccaggtctacatatcaagcctatccacttgaagaattcaggagca
gaaaaggttgcatcaaatggcaaacaacacctcgctttgaaaaataaggcagaagttaat
ggggctattacaccagtgcaatcaaatggttgcgagactgaaaaatctgcagaacccagt
aaaacacatggtaatgacattacttgtgataagatggacatcggttcacaaaaaatgttg
caagatgcagatggaaatgggcatccagttcatttcactgacctccaagagaccagtggt
gttgtggccacatgtgctgaaaagccatttagcgttgtgtcctcaacactggacaaggat
atttgtactccggaaaattctaaaagctcagttttacagcaaggagtatctgctgcagtc
aaagaggtggccacttcagtcaaggatagtacatgcgtaaagcatcatcttgatgaaggg
aagtttaaggaaatgcttgctgaatcagcatcttctgagcttcggtcctctgtttgggcg
gatgatgtctgtaatttcatgcgttctgcaaagaggcagtgtatacaaaagacagacaca
cctgtagatagtgatgcaatcagaaaacagttaataagtgattctggaagagtatttagg
tcaaaaattccggagttactaagggaagatctgattcaatccctgagatcatactttgag
gagaaattttga
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