Lolium rigidum (rigid ryegrass): 124707467
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Entry
124707467 CDS
T09103
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124707467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124707467
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124707467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
124707467
NCBI-ProteinID:
XP_047095080
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Position
4:complement(249222652..249225153)
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AA seq
789 aa
AA seq
DB search
MGPLSAYGNPTTGPPTGTPQSLAEDFQSLSLRFPPGTLDLGVDVKGLPRPLDGDEEPAKV
LEAYPMNCHPRYFRLTTHAIPASQSLVSRWHLPLGAMVHPLAKSPDGEEVPVVDFESAGV
IRCRRCRTYINPYVTFADAGRKWRCNLCSLLNDVPGEYFCALDASGRRYDTDQRPELCKG
TVEFVAPTEYMVRPPMPPSYLFLIDVSVSAVRSGLLEVVAKTIKSCLGDLLAFPRTQIGF
VTFDSTLHFHSFKSSLSQPQMMVVADLDDVFLPLPEDLLVNLVDSRQVVESFLDSLPSMF
DDNANVESALGPALKAAFMVMGQFGGKLLVFQSTLPSLGIGRLRLRGDDVRAYGTDKEHI
LRVPEDAFYKQMAAEFTKNQIAVDVFSLSDRYCDVASLGSLAKYTGGQVYHYPAFHATTH
GDKLNHELSRNLTRETAWESVMRVRCGKGVRFTTYHGHFMLRTTDLLALPAVDPDKAFAM
QLSLEESLMTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVTDLGEMYRQADTGAIVSLL
ARIAVENSLSDKLDSVRQQLQLKLVRSLKEYRSLYVVQHRIGGRLIYPESLRYLPLYILA
LCKSLALRGGYADVSLDERCAAGFSMMILPAKRLLNFVYPSLYRLDEVLTVEPDRIDGSL
RRSPLTLQCLDSAGLYLLDDGFTFLVWLGRMLQPEVVNDVFGVSLANIPDLSKVQLTECD
NNHSRNFMTVLRTLWGKDSSCYQLPRVVRQGEQPRESFLLLSNLVEDQMAGTSSYVDWIL
QIHRQTQGS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggccactgtccgcttatggtaatcctactacggggcctccgacaggcacgccccag
agcttagcggaggacttccagtctctgtcgctgaggtttccgcctggaacgctcgacctg
ggcgttgatgtgaaagggctgccacggccattggacggcgacgaggagcccgccaaggtt
ctggaggcgtacccgatgaactgccacccgaggtacttccggctgacaacccacgctatc
ccggcgtcccagtcgttggtctccaggtggcatttgccccttggggccatggtgcatcct
ctcgcgaaatcgcctgatggggaggaagtgccggttgtcgactttgagtcggctggcgta
atccgttgccgaagatgcaggacatatattaacccgtatgtaacttttgcggatgctgga
aggaagtggcgctgcaacctttgctccttgctcaatgatgttcctggtgagtacttctgt
gctcttgatgctagtggcagaagatatgatacagatcaaaggccggaactttgtaaggga
acagttgagtttgttgctcctacggaatatatggttcggccaccaatgccgccttcgtat
ttatttcttattgatgtctcagtatctgcagttcgaagtgggctgctagaggtagttgca
aagaccatcaaatcgtgccttggtgatcttctggcctttccacggacacaaattgggttc
gtaacctttgacagcacattacacttccacagtttcaagtcttccttgagtcagcctcaa
atgatggtggttgctgatttggacgatgtgttcctaccattgcctgaggatctcttggtt
aatttggttgactctagacaggttgtcgagtcatttctcgatagcttgcccagtatgttt
gatgacaatgctaatgtagaatctgctcttggtcctgcacttaaggcagcattcatggtt
atgggtcaatttgggggaaagttgcttgtcttccagagtacgttgccatctcttggtatt
ggccgcttgagacttcgaggagatgatgtccgtgcatatggaacagataaggagcatatt
ctgagggtaccagaagacgccttttataaacagatggctgcagagttcacgaaaaatcag
atcgctgtggacgtcttttctttgagtgacagatattgtgatgtagcttccttaggttct
ctggcaaagtatactggtggtcaggtgtaccattatccagctttccatgcaactactcac
ggggataaacttaaccatgagcttagcagaaaccttactcgggagactgcttgggaatct
gttatgcgtgtcagatgtggaaaaggggtgcgtttcaccacatatcatggtcatttcatg
ctaaggaccacagatttgttagctcttccagctgttgaccctgataaagcatttgcaatg
caactgtctttagaggagagcctaatgaccacacagactgtatacttccaagtggcattg
ctatatacatcatcttctggtgaaagacgtatcagggtgcatacagcagctgcacctgtg
gtcacagatcttggtgaaatgtatcgtcaagcagatactggtgccattgtgtcattgttg
gctagaatcgctgttgaaaactcactctctgataagctggatagtgtccgacaacaattg
cagttaaagcttgtcagaagtttgaaagaataccggagcctatatgttgtacagcaccga
ataggagggagactgatatatccagaatcattaagatacttgccattatacatcctggcc
ttgtgcaaatctcttgctctgcgtggcggttatgctgatgtctctcttgatgaacggtgt
gctgctggtttcagtatgatgatactgcctgcgaagaggctgctcaattttgtctatcct
tctttgtacaggcttgatgaagtattgacagtggagccagataggattgatgggtccttg
aggcgatcgccattaaccttgcagtgcctagactctgctggtttatatcttcttgatgat
ggattcaccttcctagtatggttaggtaggatgctccaacctgaggtcgtgaacgatgtt
tttggagtcagcttggcaaatatccctgatctatcaaaggtccagttgacagaatgtgac
aacaatcactcgagaaatttcatgacagtactaagaaccctatgggggaaggattcttcg
tgttaccagctaccccgtgtggtacggcaaggagagcagcccagagaaagcttcttgctg
ttgtccaaccttgtcgaggatcagatggctggaacaagcagctacgtggactggatactc
caaattcatcgccaaacacaaggctcctga
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