Lolium rigidum (rigid ryegrass): 124707494
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Entry
124707494 CDS
T09103
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124707494
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124707494
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_3
RL
P_C10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
124707494
NCBI-ProteinID:
XP_047095106
LinkDB
All DBs
Position
4:250695787..250701157
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AA seq
492 aa
AA seq
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MAEASKVIHIRNVGQEIAEADLLQLMQPFGTVSKVVMLRAKNQALLQMQDIHSSVSALQY
YSTVQPSVRGRNVYIQFSSHQELTTDQSSHGRNSDQDSEPNRILLATIHHMMYPITVEVL
HQVFKAYGFVEKIVTFQKSAGFQALVQYQSRQEAVEAFGALHGRNIYDGCCQLDIQYSNL
SELQVHFNNDRSRDFTNPSLPTEQRPRPSQQGFPDPGGLYAFQQPGAPFAQMGRAAMIAA
AFGGSLPPGVSGTNERCTLIVSNLNTEQTNEDKLFNLFSLYGNIVRIKVLRNKPDHALVE
MADGFQSELAVHYLKVCAFSLVPIYEVSLFHFVCNISLLLLFVHCIIASFNIWDAILSIF
CLQGAMLFGNKLEVNYSKYPTITPSADAHEYTNSSLNRFNSNVVKNYRHCCAPTKMIHIS
ALSQDISEDAILTHVSEHGSVVGTKLFEVNGKRQALVLFESEEEATEALVSKHASSLEGN
TIRISFSQMQSL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgtccaaggtgatccacatccggaacgtcggccaggagatcgccgaggcc
gatctgcttcagctgatgcagccgttcggcacggtgtccaaggtcgtcatgctgcgtgcc
aagaatcaggctcttctccagatgcaagacattcactcctccgtcagcgccctgcagtac
tacagtactgtccaacctagcgtaagaggaaggaatgtttacatacaattttcatcccac
caagaacttaccactgaccagagctctcatggacggaattctgatcaggactcagaaccc
aaccgaatccttttagctaccattcaccacatgatgtatcctataacagtggaggtctta
catcaagttttcaaagcatatggatttgtggagaagattgtcacatttcagaagtcagct
ggtttccaagccctcgtccagtatcaatcacgtcaagaagctgtggaagcatttggtgct
ttgcatggaaggaacatctatgatggttgctgccagctagacatccaatattccaatctc
agcgaactgcaagtccatttcaacaatgatcggtctagggatttcacaaatccatcattg
cccacagaacaacgtccaaggccctctcagcaaggttttccagatcctggcggtctttat
gccttccaacaacctggagctccgtttgcacagatgggaagagccgcaatgattgcagct
gcatttggtggatctttaccgcctggagttagtggtaccaacgaacggtgcacactgata
gtcagtaatttaaacaccgagcaaaccaatgaggataagctcttcaatctcttctcttta
tatggaaacatagttcgaatcaaggtactacgcaacaaaccagatcatgcccttgtagaa
atggctgatgggtttcagtctgagctggctgtccattatctaaaggtgtgtgcgttttct
ctagtaccaatctatgaggtttctctgttccattttgtatgtaatatatccctgttattg
ttattcgtacattgtataattgcttcatttaacatttgggatgccattttgtccattttt
tgcctgcagggtgcaatgctatttgggaacaagctggaagttaactactcaaagtacccc
actataacaccttccgccgacgcgcatgaatacaccaattcaagccttaacaggtttaat
agcaatgtggtcaagaactaccgacattgttgtgctccaacaaagatgatccacatttct
gccctctcccaagacatctctgaggacgcgatccttactcatgtgtctgagcacggttct
gttgtcggcacaaagctattcgaggtgaacggcaagaggcaggcactcgtcttgtttgaa
tctgaagaggaagcaaccgaggcccttgtgtcaaagcatgccagctcactggaggggaac
accatccggatttcgttttcccagatgcagagtttatag
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