Lolium rigidum (rigid ryegrass): 124707543
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Entry
124707543 CDS
T09103
Name
(RefSeq) coronatine-insensitive protein homolog 1b-like isoform X1
KO
K13463
coronatine-insensitive protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124707543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124707543
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124707543
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
124707543
NCBI-ProteinID:
XP_047095162
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Position
4:complement(254962321..254967536)
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AA seq
599 aa
AA seq
DB search
MGGEAPEPGRLTRALSILDGSGVPEEALHLVLAHVDDPRDREAASLACRRWHRIDALTRK
HVTVPFCYAVSPARLLARFPSLESLAVKGKPRAAMFGLIPDDWGAYAQPWVAHLAAPLEC
LKALHLRRMVVTDDDLDALVRARGHMLQELKLDKCSGFSTDALRLVARSCSRSLRTLFLE
ECTITDNGTEWLHDLAANNPVLVTLNFYLTYLTVVPADLELLARNCKSLISLKISDCDLS
DLIGFFQIATSLEEFAGAEISEQGELRKYADVKLPSKLCSFGLTFMGTNEMHIIFPFSAV
LKKLDLQYTFLTTEDHCQLIAKCPNLLVLAVRNVIGDRGLGIVADTCKKLQRLRIERGDD
EPGMQEEEGGVSQVGLTAVAVGCRELESIAAYVSDITNGALESIGTFCKNLYDFRIVLLD
KQERITDLPLDNGVRELLRGCTKLRRFALYLRPGGLSDVGLSYIGQHSGTIQYMLLGNLG
ETDGGLISFAAGCRNLRKLELRSCCFSERALALAMLQMPSLRYVWVQGYRASQTGGDLML
MARPFWNIEFTPPSTENAGRPMEEDGQPCIDRHAQVLAYCSLIGKRSDYPQSVVPLHPA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggaggccccggagccgggccgcctgacccgcgcgctgagcatcctcgacggc
agcggcgtcccggaggaggcgctgcacctggtgctcgcccacgtcgacgacccgcgcgac
cgggaggccgcctcgctcgcctgccgccgctggcaccgcatcgacgcgctcacgcggaag
cacgtcaccgtgcccttctgctacgcggtgtccccggcgcgcctgctcgcgcgcttccca
agcctcgagtcgctcgccgtcaagggcaagccgcgcgccgccatgttcggcctcatcccc
gacgactggggcgcctacgcgcagccctgggtcgcccacctcgccgccccgctcgagtgc
ctcaaggcgctccacctgcgccgcatggtcgtcaccgacgacgacctcgacgccctcgtc
cgcgcccgcggccacatgctgcaggagctcaagctcgacaagtgctccggcttctccacc
gacgcgctacgcctcgtcgcacgctcctgcagcagatcactgagaactttgtttctggaa
gaatgtacaattactgataatggcactgaatggctccatgaccttgctgccaacaatcct
gttctagtgaccttgaacttctacttgacttacctcacagtggtgccagctgacctcgag
cttctggccaggaattgcaagtcactaatttcactgaagattagcgactgtgacctttca
gatttaattggatttttccaaatagctacatcattggaagaatttgctggagcggaaata
agtgagcaaggggagctcagaaagtatgcagatgttaaacttccttcaaagctttgctcc
tttggacttactttcatggggacgaatgagatgcatataatcttccccttttctgctgta
ctcaaaaagcttgatttgcagtacactttcctcaccactgaagaccattgccagctcatc
gcaaaatgtcccaacttattagttcttgcggtgaggaatgtgattggagatagaggatta
gggattgttgcagacacatgcaagaagctacaaaggctcaggattgaacgaggggatgat
gaacctggtatgcaagaagaggaaggaggagtttctcaagttggcctaacagctgtagcc
gtaggttgccgtgaactggaaagcatagctgcctatgtgtctgatatcacaaatggagcc
ctggaatctattggaactttctgcaaaaatctctatgacttccgcattgtcctactagac
aaacaagagaggataacagacttgccacttgacaatggtgtccgtgagctgctgaggggt
tgcacgaagcttcggagatttgcgctatacttgagaccaggggggctttcagatgtaggc
cttagttatattggacagcacagtggaactatccagtacatgctcctgggaaaccttggg
gaaaccgacggtggattaatcagttttgcagcggggtgccggaacctacggaagctggaa
ttgaggagctgttgcttcagtgagcgggctttggctctcgctatgctacaaatgccttct
ctgaggtatgtatgggtgcagggctacagagcctctcaaacgggcggagacctcatgctg
atggcaaggcccttctggaacatagaatttacacctcccagcaccgagaatgcaggtcgg
ccgatggaggaggatgggcagccttgtatcgatagacatgcccaggtgcttgcatattgc
tcacttattgggaagaggtcggactacccgcaatctgttgttcctttgcatcctgcgtga
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