Lolium rigidum (rigid ryegrass): 124707878
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Entry
124707878 CDS
T09103
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124707878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124707878
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124707878
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
F-box-like
LRR_Zer-1
LRR_At1g61320_AtMIF1
Colipase-like
Motif
Other DBs
NCBI-GeneID:
124707878
NCBI-ProteinID:
XP_047095531
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Position
4:complement(282032350..282036420)
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AA seq
377 aa
AA seq
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MVSARSLDGELDSCFRNLTVSRGGGRGQAETGGDMPTLSGWKDLPMELLMRIISVVGDDR
IVVVASGVCTGWRDTLGWGVTNLSLSWCQQNMNNLTISFAHKFTKLQVLTLRQIKPQLED
SAVEAVANYCYDLRELDLSRSFRLSDRSLYALANGCPRLAKLNISGCSSFSDSALIYLSC
HCKNLKCLNLCGCVKAATDESLQAIARNCAHMQSLNLGWCDNVTDEGVTSLASGCPDLRA
LDLCGCVLITDESVIALASGCPHLRSLGMYYCQNITDRAMYSLANSCVKSKRGRWGAVRS
SSSKDIDGLANLNISQCTALTPPAVQAVCDSFPSLHTCPERHSLIISGCLSLTSVHCACG
LQRHRAEGTLQPTSHAY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggttagtgcgaggtcactggacggggagttggattcgtgcttcaggaacctcacggtg
tctcgtggcggtggaagggggcaggctgaaactggtggtgatatgcctacattgtcaggt
tggaaggaccttccgatggagctgctcatgcggattatatcagttgttggagacgatcga
atcgtcgttgtggcatccggtgtttgcactggctggcgtgacacgttaggatggggggtc
actaatctttccctctcatggtgccagcagaacatgaataatttaacaatatcatttgct
cacaagttcacaaagcttcaggttctcactcttcgccaaatcaaacctcagcttgaagac
agtgcagtagaggctgttgccaactactgttacgatctacgtgagttagacctcagcaga
agtttcaggcttagtgaccgctcactgtatgcactggccaacggatgtcctcggcttgca
aaacttaacatcagtggatgttccagtttcagtgacagtgccttaatataccttagttgc
cactgcaaaaacctgaagtgcttgaatctgtgtggatgtgtgaaggcagccactgatgaa
tctttgcaggccatagcccgtaactgcgcgcacatgcaatctttaaacctaggttggtgt
gacaatgtcacagatgagggggttaccagtttggcatcaggttgccctgatctgagggcc
ctagatttgtgtggttgtgttcttataacagacgagagtgttattgctcttgcaagtggg
tgccctcaccttcgatccttgggcatgtactactgccagaacatcaccgaccgtgccatg
tactccctcgcaaacagctgtgtgaagagcaaacgagggaggtggggtgcagtgaggagc
agcagctcaaaggacatcgacgggctggcaaacctcaacatcagccaatgcacggcactg
acacctccagctgttcaggcggtctgcgactccttcccgtcactccacacctgtcctgag
aggcactccctcatcatcagcggctgcctcagcctgacgtctgttcactgtgcctgtggc
ctccagcggcaccgtgctgaaggcaccctgcaacccacgagccatgcctactga
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