Lolium rigidum (rigid ryegrass): 124708173
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Entry
124708173 CDS
T09103
Name
(RefSeq) tRNA pseudouridine synthase A 1-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124708173
Enzymes [BR:
lrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
124708173
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124708173
Prokaryotic type
124708173
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
124708173
NCBI-ProteinID:
XP_047095818
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All DBs
Position
4:90253382..90257545
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AA seq
278 aa
AA seq
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MVISYDGTKYKGWQYQPSPPTIQFFLEKALIHITKLDRKELCLVGAGRTDAGVHARGQVA
HFTTPFAYHCLDSFHSAINGLLPPDIRVREISEASPEFHARTSSKSKIYHYKIYNGAVMD
PFHNNYAYHSAHKLNPDAMREAAKHFVGVHDFTSFANAVHNDRVRSPIKQISRFDVTEMD
AIIQLEVEGTGFLYRQVRNMAALLIQVGKEGLPPGIVPKIIAAKDRKELAKVAFLAPPHG
LYLMSVNYDKEILKPPEGSPPISFGRNHQISRCKLLFY
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggtgatctcctacgacggtaccaagtacaaaggttggcagtatcaaccatcacctcca
accatacaattctttttagagaaagcactaatacacataacaaagctggaccggaaggag
ctttgtttggttggtgcaggaaggacagatgcaggtgttcatgcacggggtcaggtggca
catttcaccacgccttttgcctaccattgtctcgatagctttcattctgcaatcaatggg
cttctacctcctgatattcgagttagggaaattagtgaagcaagtccggaattccatgct
cgcacatcctcaaagagcaaaatatatcactacaagatctataatggagcagttatggac
cccttccataataattacgcctaccatagtgcacataaacttaatccagatgctatgcgg
gaggctgcaaagcattttgttggagtacatgacttcacatcttttgccaatgcagtacac
aacgatcgtgtccgcagtcccataaagcagatatcacgctttgatgttactgaaatggat
gctatcatacagctcgaggttgaaggcactgggtttttgtacagacaagtgaggaacatg
gcagctttgctaattcaagttgggaaggagggactgcctcctggaatcgtcccaaaaata
attgctgcaaaggaccgcaaagaactagcgaaggtggcctttttagcaccacctcatgga
ttgtatctcatgtcagtcaactatgacaaagaaattttgaagcctcctgaagggtcccct
ccgattagctttggtaggaatcatcagattagtagatgcaaacttttgttctattga
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