Lolium rigidum (rigid ryegrass): 124708250
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Entry
124708250 CDS
T09103
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124708250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124708250
04147 Exosome [BR:
lrd04147
]
124708250
04090 CD molecules [BR:
lrd04090
]
124708250
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124708250
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124708250
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124708250
CD molecules [BR:
lrd04090
]
Proteins
124708250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_16
Zeta_toxin
AAA_15
DUF87
AAA_5
AAA_21
AAA_23
AAA_30
AAA_25
CRR42-like
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
124708250
NCBI-ProteinID:
XP_047095891
LinkDB
All DBs
Position
4:4396691..4403001
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AA seq
1237 aa
AA seq
DB search
MVAGAAGAVANGVSQPLMTLLFGDVIEAFGSASRHDVLHRVSEVCLKFFYLAIGSWFACF
LQVTCWMITGERQSARIRGLYLEAVLRQDIAFFDKEMTTGQVVEGMSGDTIHIQDAIGEK
VGKFIQLTSTFIGGFAVAFTKGWLLSSVMLSCIPPIVIAGATMSWIISKLSTQGQSKYNE
AGNVVEQTIGAIRTVASFNGENRATTLYNKYIGNAYVCDVQEGTATGLGFGFVMFILFCT
YGLTAWYGAKLITDKGYGGGQVVSVWMAFMTGAMSLGEATPCLTAFASGQAAGYRMMRTI
RREPEIYSDVIDGIVLENLRGDIEMRNVYFRYPSRPDQLIFDGFSLHVLCGTIMAIVGES
GSGKSTVINLLERFYDPQTGEVLIDGVNMKNLRLGHIREKIGLVCQEPLLFATTVRENIV
YGRDDATTEEIMVAAELANAAKFIDKLPNGLDTIVGEHGAQLSGGQKQRIAITRAILKNP
KILLLDEATSALDLDSERVVQEALGRVMRDRTTVIVAHRLSTIKDADIISVVRCGRVAEQ
GTHIELLKNPSGAYSQLIQLQDLTEGPDNSDVGYQKSISTNLNVRSISKSSQSNNASFKR
SVGGGTSYGSTSMNLVSTAGLIVPESTHTELQSSADGEEHRRVALSRLISLNKPEIPVIL
LGTVAAVISGALFPLLGLLISSSINSFHEQPHELRRDSRFWTLMYIAAGVASLISLPMEY
YLFGLAGGKLVERIRSLSFERVVHQEISWFDNPTNASGTIGARLSVDASNIRRLIGDSLA
LIIRSTVTILAGFIIAMVSNWRLALIATVILPSGGLQGYLQIKFLEGFSSDAKVMYEEAT
QVANDAVSGIRTVASFCAEHKVMKAYYKKCEAPVRQGIRQGIVSGLGFGVSFFVLYCTYA
LCFYVGAKFVLDGKATFTEVFRVFFALLMATIGVSQTSALGSDSAKAKESASSIFALIDR
KSRIDSSSDDGMVLADVAGELELCQVCFSYPSRPSVQIFRDLSLRIPPGKTVALVGESGC
GKSTVIALLERFYDPDSGMVMLDGVDIKNLKVGWLRQQMGLVSQEPVLFNDTIRANIAYG
KQGEATEDEIIAVAKAANAHQFISSLPHGYDTCAGERGVQLSGGQKQRVAIARAILKDPR
ILLLDEATSALDAESEHAVQEALDRVMVGRTTVVVAHRPSTIKGADVITVLRNGEVVAMG
RHEQLMALKDGVYASLVELHHMDPERTGKGQSVSYGL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggtggccggcgcggctggggcggtggccaacggcgtgtcgcaaccgctcatgactctc
ctcttcggcgacgtcatcgaggcgttcggctccgcatcccgccacgacgtccttcaccgc
gtctccgaggtgtgcttgaagttcttctatttggccatagggtcttggtttgcttgcttc
ctccaggtcacatgttggatgattactggagaaaggcaatctgcccgtattcgaggcctc
tatcttgaagctgttttgaggcaagatattgcattttttgacaaggaaatgacaaccgga
caagtggttgaggggatgtctggagatacaatacacatccaggatgcaattggtgaaaag
gttggaaagtttatacaacttacttctacctttattgggggttttgcagttgcttttacc
aaaggatggcttttatcatctgttatgctgtcatgtattcctcctatagtaattgctggt
gcaactatgtcatggatcatatccaaactgtcaacccagggtcaatccaagtataatgaa
gcagggaatgttgttgaacagacaattggagctatcagaacggtcgcttccttcaatgga
gagaaccgagccactacgctatacaataaatacattgggaatgcatatgtttgtgatgtt
caagaaggcacagctactggcctgggctttggttttgttatgtttatccttttctgcacc
tatggtctaacagcatggtatggggcaaagttgattactgataaaggatatggaggaggg
caggttgttagtgtctggatggcattcatgacaggtgcaatgtcactaggtgaggcaaca
ccatgcttgactgcttttgcttctgggcaagctgctggctatagaatgatgcgaacaatt
cgaagggagccagaaatttattccgatgtaatagatggtattgtattagaaaacctcaga
ggtgatatagagatgaggaatgtatacttcaggtatccatctaggcctgatcaattgata
tttgatgggttttcattacatgttctgtgtggtacaataatggctatagtaggagagagt
ggcagtggaaagtcaactgtgattaatcttctagagagattctatgaccctcagactggt
gaagttttaatagatggtgttaacatgaagaatctgaggcttggacatataagggaaaaa
atcggccttgtctgccaggaaccgctgttgtttgctaccactgtccgtgagaacatcgtt
tatggcagagatgatgcaacaactgaggagataatggttgctgccgagcttgctaatgcc
gcaaagttcattgacaagctacctaatggtctagatactatagtcggcgagcacggagca
cagctttctggagggcaaaagcaaagaattgccatcacgagggccatcctgaaaaatcca
aaaatcttgctgcttgatgaagcaaccagtgcactagatttggattctgagcgagttgtt
caagaagcccttggtagagttatgcgagataggaccacggtcatagttgctcataggctc
agcactataaaagatgctgacattatatcagtcgtgcggtgtggaagagtagctgaacaa
ggtacgcacattgaactactgaagaaccccagtggtgcatactcccagcttatacagttg
caggatttaaccgaaggaccagataattctgatgttggttatcagaagtcaatctcaact
aacctaaatgtccgatccattagcaaatccagccaaagtaataatgcatcgttcaagaga
tcagtaggtggtggaacttcatatgggagcacaagcatgaatttagtttctactgctggc
ctgattgtcccagagagcacacatactgaactgcagtcgtctgctgatggtgaagagcac
aggagggtggccctctctcggcttatttctcttaataaaccagagataccagttattctg
ctaggtactgttgctgcagtcatctcaggtgctctctttccattgttaggtttattgatc
tccagttccataaactcatttcatgagcaaccacatgaactccggagagactcccggttt
tggacattgatgtatatagcagcaggagttgcttcactcatttccttgccaatggaatat
tacctatttggactggctggcgggaagttggttgagcgcattcgttctttatcctttgaa
agagttgtccatcaagaaatcagctggtttgataaccccacaaatgctagtggaacaatt
ggcgctagactgtctgttgacgcttcaaatattcggcggcttataggagactcattggcg
ctgattattcgcagcactgtcacaatcctggctggatttatcattgcaatggtttcaaat
tggaggcttgcccttattgctacagtgatactaccttcgggtggtctccagggatatctt
cagataaagtttttggagggattcagttcagatgccaaggtgatgtatgaagaagcaact
caagtagcaaatgatgctgtcagtggtatacgaactgttgcttccttctgtgctgagcat
aaggtaatgaaggcttactacaaaaagtgcgaagctccagtgcgtcaggggatccgtcaa
ggcattgtcagtggtttgggttttggcgtatcgttcttcgtactgtattgcacatatgcc
ctttgtttttacgtgggagcaaagtttgtgcttgatggcaaggccacattcactgaagta
ttcagggtgttctttgctttgctcatggcaacgataggagtttcacagacaagtgcactg
ggttcagattctgccaaggccaaggaatcagcatcctcaatatttgccctcattgaccgt
aaatcgcggatcgactcaagcagtgatgacggcatggtcttagctgacgtggctggtgaa
cttgaactctgtcaagtctgcttctcctacccatcccgcccaagtgtgcaaatattcaga
gacttgtcactgaggataccaccagggaagacggttgcccttgttggagagagcggctgt
ggtaaatccaccgtgatagcactactggagagattctacgaccctgattcgggcatggta
atgttagacggtgtcgacatcaagaatctgaaagtcggctggttgaggcagcagatgggg
ctggtgagccaagagcccgtcctgttcaacgacaccattcgtgccaacattgcctacggc
aaacaaggcgaggcgacagaagatgagataatcgctgtcgctaaggctgcaaacgctcat
cagttcatatcatcgttgcctcatggctacgacacctgcgccggcgagaggggggtccag
ttatccggcggacagaagcagcgggtcgccatcgcaagagccatcctgaaagaccctagg
atccttctccttgacgaagcgacgagcgcactggatgccgagtctgagcatgctgtccag
gaggcgctggaccgggtgatggtcggcaggaccaccgttgtcgtggctcaccggccgtcg
acgattaaaggcgccgacgtcattaccgtcctgaggaacggcgaggttgttgccatgggg
agacatgagcagctgatggccctgaaggatggcgtgtatgcttctttggtggagctccac
cacatggatccagagcgcaccggcaaggggcaatctgtcagctacggtttgtaa
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integrated database retrieval system
