Lolium rigidum (rigid ryegrass): 124708252
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Entry
124708252 CDS
T09103
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124708252
04121 Ubiquitin system [BR:
lrd04121
]
124708252
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124708252
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
124708252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
Motif
Other DBs
NCBI-GeneID:
124708252
NCBI-ProteinID:
XP_047095895
LinkDB
All DBs
Position
1:complement(56211083..56214421)
Genome browser
AA seq
1112 aa
AA seq
DB search
MQPSTDRRRGNDNGNPATPASHGLWRPRYAAPAPTPAAADPRPIPTYVPPHHRRNTAPNP
PLPNPASDARPHQHQTPPHERAPSSRYNSSIHHRRGPPQVKAPPAPMNAPASADAPALAP
PAAVPQLVQEIQDKLARGTVECMICYDMVRRSAPVWSCGSCFSIFHLPCIRQWARAPASV
SDASHPAAASWRCPGCQSVQDLPARHIAYTCFCGRRRDPPNDLFLTPHSCGEPCSKPLGQ
TNPPAATKGAAYPDEDDHVAARCPHVCVLQCHPGPCPPCKAFAPERPCPCGKQSITCRCA
DPSTPVTCGQQCQQLLTWGRHRCEKVCHTGPCGDCQVSVSAQCFCGKKTETLLCGEMAAK
SEKDGVFSCTAVCGRNLSCGNHACEDVCHPGPCRECALVPGKVTTCHCSKTWLQENRASC
LDPIPTCDKVCDKKLPCGVHRCKVTCHEGKCPPCLVRVERRCRCGSSGQMVECYMVSVEE
FCCNKPCGCKKNCGRHRCSECCCPLSKPFAQHEGGNMDPHFCQIQCGKKLRCGQHGCQHL
CHSGHCDPCRETMFSDLTCACGSTSILPPQPCGTPAPSCPHQCIVPQPCGHPASHQCHFG
DCLPCVVPVTRECSGGHVMLRNIPCGSKDIRCNQPCGKNRQCGLHACARTCHPSPCDPPP
ANGDASSSSGSKVSCGQLCGVPRRECKHTCNTPCHPSSPCPDVRCEVRVTITCSCGRITS
TVPCSAGGSYTGDSMFDTSIIQKLPMPLQSVESSGMRVPLGQRKLCCDEECAKVERKRVL
AEAFDIIPPNLDALHFGENSSASELLSDLLRREPKWVLAIEERCKFLVLGKGRGNSSSNI
KVHVFCQMTKDKRDAIRLIADRWKLSIQAVGWEHKCFVTIHVTPKSKVPARVLGSKAGIP
VSASYPYFDPMLDMDPRLVVSMLDLPREADVSSLVLRFGGECELVWLNDKNALVVFRDPA
RAVTALRRLDYGSAYQGAAMFCPSSITQASSSGNVWVRAQRDGGSTAQGSANPLKKAGAS
EPGSSGDRHSPGTSVLGQAPGSAWRQADTPGQVMGTSRLTALESPSGTSSVPADKRKPDL
RTDAGSRAQSAGQAVPKLQPNLEVENWEESCE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcagccctccaccgatcgacgccgcggcaacgacaacgggaacccagccacgcccgcc
tcccatggattgtggcgccctcgatacgctgcgcctgcccccactcccgccgccgccgac
ccccgtccgatccccacctatgtgccaccccaccaccgtcgcaacaccgccccaaacccg
ccactcccgaaccctgcctctgacgcccgcccgcaccagcaccaaaccccaccgcacgag
agggctccgtccagtcgctacaacagcagcatccaccaccgccgcggcccgccgcaggtg
aaggctccacccgcacccatgaacgcccctgcatcggcagatgcccccgcgctcgcgccc
ccagcggcggtgccgcagctggtgcaggagatccaggataagctggcgcgggggactgtg
gagtgcatgatctgctacgacatggtgcggaggtcggcccccgtctggtcctgcggcagt
tgcttctccatcttccacctcccctgcatccgccagtgggcgcgcgccccggcctccgtc
tccgatgcctcccacccggccgccgcctcctggcgctgcccggggtgccagtccgtgcaa
gacctgcccgctcgccacatcgcctacacctgcttctgcgggcgccgccgcgatcccccg
aacgacctcttcctcaccccacactcctgtggcgagccctgctccaagcccctcgggcaa
acaaatcctcctgctgctaccaagggcgcggcctaccctgatgaagatgatcatgttgcc
gccaggtgcccgcacgtctgcgtcctgcagtgccaccctgggccgtgtccaccctgcaaa
gcctttgctccggagaggccgtgtccttgcggcaagcagtctatcacttgccggtgcgcg
gacccgagcacgcctgttacatgtggacagcaatgccaacagctgctcacctgggggagg
caccgttgcgagaaggtctgccacaccgggccttgcggggactgccaggttagcgtctct
gcacagtgcttctgtggcaagaaaacagaaaccttgttgtgcggcgagatggcggcgaag
tcagagaaggatggggtgttctcttgcactgcggtttgtggccgcaatctttcatgtggg
aaccatgcctgcgaggatgtttgccacccagggccatgcagggagtgcgcgcttgtgcca
gggaaggtcaccacatgccattgcagcaagacatggctccaggagaatagggcgagctgc
ttggacccaatccctacttgcgacaaggtttgcgacaagaaattgccgtgtggtgtgcat
aggtgcaaggttacatgtcatgaggggaagtgtccgccgtgcttggtacgcgtcgagcgg
aggtgccgctgcggctcatcaggccagatggtggagtgctacatggtctcggtggaagag
ttctgttgcaacaagccttgtggctgcaagaagaactgcgggaggcacaggtgcagtgag
tgctgttgcccgctgtcgaagccatttgctcagcatgaaggtggcaacatggatcctcat
ttctgccagatacaatgtggcaagaagctccggtgtgggcagcacggatgccagcatctc
tgccacagcggtcactgcgatccttgccgcgagaccatgttcagtgatctcacttgtgcc
tgtggcagtacatctattctgccaccgcagccgtgcggcacaccagctccatcatgcccg
catcagtgcattgtccctcaaccttgtgggcatccagcttcgcatcaatgccattttgga
gactgcctgccttgcgtggtgccagtaacgagagaatgcagtgggggacatgtgatgtta
aggaacatcccttgtggttcaaaggacatccgatgcaaccaaccctgtggtaagaaccgt
caatgtggactgcacgcttgcgccaggacttgccatccttccccttgtgatccgccgcct
gcaaatggagatgctagttcaagctctgggagcaaggtttcatgtggacagttatgtggt
gtcccaaggagggaatgcaagcacacttgcaatacaccatgccacccatcatctccttgc
ccagacgtgagatgtgaagtccgtgtgactattacctgttcttgtggccgtatcacttca
actgtgccctgcagtgctggtggatcatacactggtgatagtatgttcgatacctccatc
atacagaagctgccaatgcctctccaatcagtggaatcaagcgggatgagggtacctctt
ggacagaggaaactttgctgtgatgaggagtgtgcaaaagtggagagaaaaagggtcctt
gctgaagcttttgacattataccacccaatctcgatgcattgcatttcggtgagaactca
agcgcatcggagttgctttctgatcttctccgacgagagccaaagtgggtgctggccata
gaggagcggtgcaaatttcttgtacttgggaaggggcgaggaaattcttcaagtaacatc
aaggtccatgtgttctgtcaaatgacgaaggataagagggatgctatcaggctcattgca
gataggtggaagctgtctattcaggctgttggttgggagcacaagtgttttgttaccatc
catgtcacacccaagtcgaaggtgcctgctcgtgttctgggctccaaagctggtatccct
gtctcggcttcctatccttactttgatcccatgctggacatggacccgagactcgttgtt
tcaatgctggacctgccaagggaagctgatgttagctctctggtcttgaggtttggtggg
gagtgtgaattggtttggttgaatgacaaaaatgccttggtggtcttccgtgatccagct
agagccgtgacagcactgagacggctggactatgggtctgcttaccagggggctgcgatg
ttttgcccaagcagcatcactcaggcttcgtcatcaggcaatgtgtgggttcgggcacag
agggacggaggatccactgcacagggcagtgccaatccattgaagaaggctggtgcctct
gagcctggatcatccggagaccggcattctccagggacgagtgtgcttggtcaagctcca
gggtcagcttggaggcaggctgatacccctggccaggtcatgggtacatctagattgact
gctctggagtctccttctggcacaagctccgtgccagctgacaaacgcaagcctgatctt
cgcactgatgctgggtccagagcacagagcgctgggcaagcagtgcccaagctgcagcca
aacctcgaagtggaaaactgggaagaatcgtgtgagtga
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