Lolium rigidum (rigid ryegrass): 124708317
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Entry
124708317 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124708317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124708317
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124708317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
RRM_1
zf-CCHC_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
124708317
NCBI-ProteinID:
XP_047095949
LinkDB
All DBs
Position
4:complement(54278262..54282564)
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AA seq
335 aa
AA seq
DB search
MEAQSRRYVVEGCPWWNWWPSFQSLWRTLVKGALGARIREVELKRDYAFIEYSDPRDADD
ARYNLDGRDVDGSRIIVEFAKGIPRGSGGSREREYVGRGPAPGTGRCFNCGIDGHWARDC
KAGDWKNKCYRCGERGHIERNCQNSPRSFRRERSYSRSPSPRRGRARSRSYSRSRSRSYS
RSRSRSLSESPRGRRRERDARSRSLSYSRSPRRSLSPEAKEMDRSPTPDGSRSPRRSLSP
EVKDKGDSPRGRGMSRSRSPSDGYHSPVANGRSPSPRIKDGRSPTKDGSPSPARGSPSPR
GNNGSPSPRGNGDGGSPSPRGNGDGAGSPRGSLSP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacaatccagaaggtatgtggtggaagggtgcccttggtggaattggtggcca
tcgttccaaagtttatggaggactttggtgaagggtgcccttggtgctagaatacgtgaa
gtggagttgaagcgcgactatgcttttattgaatacagtgatcctcgtgatgctgatgat
gcacgatacaatctagatggaagggatgttgatgggagccgaattattgtggagttcgct
aaagggattcctcgtggatcaggtggttcacgtgaacgtgaatatgtgggaagaggtcct
gctccaggaacagggcgttgttttaactgtggtattgatggtcactgggccagagactgc
aaggctggtgactggaagaacaaatgttaccggtgtggagaaaggggccatatagaaaga
aactgccagaatagtcccaggagtttcaggcgtgagagaagttattcacggtcaccatct
ccacgccgtggacgggcccgcagtaggagctacagcagaagcagaagccgtagttacagc
cgatcaaggtccaggtccttgtctgaatctcccagagggcgccgccgggagcgtgatgca
agatcaaggagccttagctacagcaggagccccaggagatcactttccccagaagcaaag
gaaatggaccgcagccccacacctgatggcagtcggagccctaggcgatctctctcccca
gaagtgaaggataaaggtgacagccctaggggcagggggatgagcaggagcaggagccct
tctgatggctaccatagccctgtggccaatgggcgcagtccgagtcccaggatcaaagat
ggcaggagtcctactaaggatggcagtcccagtcctgctaggggcagcccaagtccgagg
ggcaacaatggtagccctagtcccaggggcaatggtgatggaggcagccctagtcccagg
ggcaacggtgatggtgctggctcacccagaggaagcttgtccccctga
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integrated database retrieval system
