Lolium rigidum (rigid ryegrass): 124708328
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Entry
124708328 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC124708328
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124708328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124708328
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
124708328
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
124708328
NCBI-ProteinID:
XP_047095957
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Position
4:54696805..54701851
Genome browser
AA seq
1318 aa
AA seq
DB search
MAIVSFSGARVHRPDGAGGDDATEDEEERSPATDDDRSPATDGFSADSDENTAAPHEEDD
SGMGSDELELTQLGDAGAEMSQIDDQSFPVPLDLLDLPDLAPVLSLDAWNTLLSDSDRLR
LAALLPDLDRDAFARTLVELLSGASFHFGSPLAALLDRLKGGLCDPRVVLYRRGARFAER
RKHYYRLQGYHNAMVRGLWEARDCWKGCQGFGLDERIRALDAMRAKRKQKAARAVSETDS
EAEQFVARPKTDKKKAGKERSKGLLRLGGGSKGLGGEEYTGRDAAAAFSDHSRQDNNAYG
YDTGVMHRGGKARRSMDGLDSEDLGGYDRDLPRVRSQKPLVKPVKKKEFATAYDANPYAK
SYRDNHTGSYYHGRNAAGNQPVTLAASFEPPYSEAARSAKYAERDRIYGGNSFHSNRALK
GDEMDWPAGSPADSLNDWQRGQPAGDYRSRVPQVGHGGKVKSYRNTEQQMNGAHSGSDPR
DRVSQGKIKVKPSSSQHGRIGQKDSRSRAAYVQSEETESDSSEQLEDGADMNPAEQQPEL
RYSELHRPAYGAKKSNKHGKTARTVYPAAPAEFEPYHTQGRGGQRGKIAEPDYLRDVHVE
VAEQISEVMRPPAARSERKRKGVSNLDMHGYDNSELHDSNEKANESFRSPESTRLASRAG
CEVQDSNGDFDGSERVNVPLASCSSGSKRQKGRVEVTSLDEHGDYSPSDPKAVEISGSLK
KKSKKKTDTVTDATTVVEPAPVVPEVIVVPVEPEKPKKKYVPITPTIHTGFSFSVVHLLT
AVKKAMVTPTEDTPVAPMVTPTEVPPVAAMVTPTEAPPAAAMVTPTEVSPAAAKQPDGEE
SRKWFNSEEPSKTPQEPTVTEQAQQANEVGDTSAAEQTAPSNSPAVTVQELVNRIKTNPG
DPNILETQEPLQDLVRGVLKILSSRTAPLGAKGWKSLVSYDKSNKSWFWVGPLPSGTSYS
DPNEETSAEAWGIPHKMLVKLVDAFANWLKSGQETLKQIGSMPPPPAPNPANLDLKERFK
DLRAQKSLNTISPSSDEARAYFQREEFLRYSIPDRAFCYTAADGEKSIVAPLRRGGGKPT
AKARGHPMLLPDRPPHVTILCLVRDAASRLPGRTGTRADVCTLLKDSQYLNHAESNKEPA
VNQVVSGALDRLHYERDPCVLYDNDKKLWTYLHRGREEEDFEDDGTSSTKKWKRPRKDSL
DPSEAGAGNDDLEDDGTPNAKKQKKDDAEPTASGEDKDGADLVILDPSNGGLEGDFDLDV
ILSSTNNEETGKPDIGISRPSIGATAGNTANDNSARIPEQFYSMALPVDSTSKEFNNA
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgtcagtttcagcggcgccagggtccaccggccggacggcgccgggggggac
gacgccacggaggacgaggaggagcggtcccccgccacggacgacgaccgatcccccgcc
acggacggcttctccgccgactccgacgagaacaccgccgccccgcacgaggaggacgac
tcggggatgggttccgacgagctggagctgacccagctgggcgacgcgggggcggagatg
agccaaatcgacgaccagagcttcccggtcccgctcgacctcctcgacctccccgacctc
gcgcccgtcctctccctggacgcctggaacaccctcctctccgactccgaccggctgcgg
ctcgccgccctcctgcccgacctcgaccgggacgccttcgcgcgcacgctcgtggagctc
ctatcaggcgccagcttccacttcgggagccccctggcggccctcctcgaccggctcaag
ggcggcctctgcgacccccgggtcgtgctgtaccgccgcggcgcgcgcttcgcggagcgg
cgcaagcactactaccgcctgcaggggtaccacaacgccatggtgcgcggcctctgggag
gcccgcgactgctggaagggctgccaggggttcgggctcgacgagaggatcagggcgctg
gacgccatgagggcgaaacggaagcagaaagctgcccgcgccgtgtctgagaccgactcc
gaggcggagcagtttgtggcgcggccgaagacggataagaagaaggctgggaaggagagg
tccaagggcctgctgcggctgggcggtgggtcgaaaggtttggggggcgaggagtacacc
ggccgtgatgccgcggcagctttctccgatcattctcgccaagataataacgcgtatggg
tatgataccggagtcatgcatagaggtgggaaggcgcgcaggagcatggacggcctcgat
tcagaggacctggggggatacgacagggatttgccgagggtccggtctcagaagccgctg
gtgaagccggtgaagaagaaggagttcgctacagcctacgatgccaacccttatgcaaag
agctaccgtgacaatcatactggttcttactaccatggcaggaatgcagccggtaaccag
ccagttaccttggcagcatcgtttgagcctccgtattctgaggcagctaggagtgcaaag
tacgcggaaagagatcggatatatggtggaaatagtttccacagtaatagagctctcaag
ggagatgagatggactggccagctggtagtcctgctgatagcttaaatgactggcagaga
gggcagcctgcgggcgattacaggagcagggtacctcaggttggtcatggtgggaaggtt
aagtcctataggaataccgagcaacagatgaatggtgcgcattccgggtctgatcctagg
gacagggtatcacaggggaagattaaagttaaacccagtagtagccagcatggtaggatt
ggccagaaggactccaggagcagagctgcatatgttcagagtgaggagacggaatccgat
tcatcagaacagttggaagatggggcggacatgaatcctgccgaacaacagccggaactt
agatattctgagcttcatagaccagcatatggtgccaaaaagtcaaacaaacatgggaaa
acagccagaacggtttatcctgctgctcctgcagaattcgaaccctaccacactcagggc
agaggggggcagagaggaaagattgcagagcctgattacttgcgcgatgtacatgtggag
gtggcggaacagattagtgaggtgatgagacctccagcagcaaggagcgagagaaagcgc
aaaggcgtgtcaaatctggacatgcatggttatgacaactctgaattgcatgatagcaac
gaaaaagccaatgaatcattcaggtcaccagagagtacgaggctggccagtagagcaggc
tgtgaagtccaagattctaatggcgactttgatggttctgaaagagtgaacgtgcctcta
gcaagttgcagctctgggtccaaaaggcaaaaaggaagagttgaggttacaagcctagat
gagcatggtgactattcaccatctgatccaaaggctgtggagatcagcggcagcttgaag
aagaaaagtaaaaagaagacggatacggttacagatgcaactactgtagtggaaccagct
ccggtcgtgccagaagttattgtggtgccagtagaacctgagaaacctaagaagaagtat
gtaccaattacaccaactatccataccgggttttctttctccgtcgtacatcttctaacc
gctgttaagaaggctatggtcactcctactgaggatactccagtggcacctatggtcaca
cctactgaggttcctccagtggcagctatggtcactcctactgaggctcctccagcggca
gctatggtcactcctactgaggtttctccagcggcagcgaagcaacctgatggggaggag
agcagaaaatggttcaacagtgaagaacctagcaaaacgcctcaagagccaactgtaaca
gagcaagcacagcaggctaatgaggttggagataccagtgctgcagagcagactgcgccg
agcaattcgccagcagtaactgttcaagagcttgttaatcggatcaaaacaaatcctgga
gatcccaacatacttgaaacacaggagccccttcaggatttagttagaggagtgctcaaa
atactgtcgtctagaacagctcctctaggtgcaaagggctggaaatcattagtttcctat
gacaagtcaaacaaaagctggttctgggttggtccactgccttctggtacttcatatagt
gaccctaacgaagagacttctgctgaagcatggggtataccacacaagatgcttgtgaag
ttggtcgatgcatttgctaattggctgaaaagtggtcaggaaaccctcaagcaaatagga
tccatgccaccacctccagcaccaaatcctgcaaatttggatttgaaggaaagattcaag
gaccttagggcccagaaaagtctgaacacaataagcccaagctctgatgaagcaagagca
tatttccaacgtgaggaatttttgagatactcgattcctgatagagcattttgctatact
gctgctgatggagagaaatctatagttgctcctttgagaaggggaggcgggaagcccaca
gcaaaagctaggggacatcccatgctcttacctgatcgccctccgcatgtcactattctc
tgtcttgtaagagatgctgcttctaggttgcctggaagaactggtacaagagctgatgtc
tgcacacttctcaaagattcgcagtacctaaatcacgcagaatccaataaagagcctgct
gtcaatcaagttgttagtggtgctcttgatcgcttgcattatgagcgtgatccttgtgtg
ctgtatgataatgacaaaaaattgtggacctatctgcacaggggtagagaggaggaagat
tttgaggatgacggcacatcatctacaaaaaaatggaagagaccaaggaaagattcttta
gatccttcagaggctggtgcaggaaacgatgaccttgaggatgatggcacccctaacgcg
aaaaagcaaaagaaagatgatgcagaacctacagcatcaggagaagataaggatggtgcg
gatcttgtaattctggatccatctaacggtgggttggaaggtgactttgatcttgatgtt
attctgtcatcaacaaataacgaagaaacaggcaagccagatattggtatttccagacct
tcaataggtgcaacagcaggcaacacagctaatgacaattccgcaagaatcccagaacag
ttttacagtatggcactccctgtggactccaccagcaaggagtttaataatgcttag
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