Lolium rigidum (rigid ryegrass): 124708351
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Entry
124708351 CDS
T09103
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124708351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124708351
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124708351
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
124708351
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
124708351
BRCA1-C complex
124708351
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
124708351
NCBI-ProteinID:
XP_047095978
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Position
4:131590524..131594741
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AA seq
581 aa
AA seq
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MVWALTPVVTARGAQKYYISAAGTYTVGRKGCDITQTDTSMSRVHAEITVEKMVAWDPHS
GAPASPSCVSLVDRSKYGTFVNKVQGSQGSRLRKDEDVMLNDGDLLTFGTGNTTFRLSFV
PIVVFFHGKKSARIDRSLQAAMTSIGAYVTRKWNDACTHVLVDESSPLTPELLDAIVTKK
TIVLGSWFKAIMEKNIHAEIPSCTQYIPNLTLDGMDIKMVENKLMENCIEGHTFILGSSE
KYKFGEKIQALLELAGAKYLNIEEFCADSENSGTGENDQQILLVPAKSPLEFSKIRALTP
LAKVTDVKLFAAILSGRLEAAAIEPPAFIITSSETTDETIVADSDVETDTAISEHTVGAS
KSEHHIQHISDNKAEGKVISSANAANLGEAEVNTSIHVDLEKDKISESMEEDVQVIEKTA
IPRFKAGGEDVQVINKVLEDENIDTTREKTSHAVFVNKALKDENLGTSGEETCHVIFSQN
LIVKRVLRPARAASAKTGGINFKRFKKRETVSGNSFRALIPFAREPYRESDQEKGTLTDF
MREEKRRKQMESIAEDLFNNQKPKKKAAAGSSIQTLLTGCR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggcgctgacccccgtcgtcacagcgcgcggggcgcaaaagtactacatctcc
gccgccgggacgtacacggtcggccgcaaaggttgcgatatcacgcaaacggacacatcc
atgtcccgagtgcatgcggagatcacagttgaaaagatggttgcctgggatccacattct
ggtgctccagccagcccttcatgtgttagtctagttgaccgctcgaaatacggcacattt
gtcaacaaggtacaaggatcccagggcagccggctacgtaaagatgaagacgtgatgctt
aacgatggagatcttttgacttttggaactggcaacacaaccttcaggttgtcctttgtc
cccatagtggtattttttcatggcaaaaagtcagcacgaattgatcgatcattgcaggca
gccatgacatctattggtgcatatgttactcgtaagtggaatgatgcatgtacacatgtc
cttgtggatgaatcctcaccattgacacctgagctcctcgatgcaatcgtcacaaagaag
acgatcgtcttgggaagctggttcaaggcaatcatggaaaagaacatacacgcagagatt
ccttcttgtacacaatatattccaaacctaactcttgatgggatggatataaagatggtt
gagaacaagctcatggaaaattgcatagaaggccatacttttatcctgggatcatcagaa
aagtataaatttggagagaaaatacaagcgttattagaattagctggagcaaaatatctc
aatatcgaggagttttgtgctgacagcgagaattctggaactggagagaatgaccaacag
attcttcttgttcctgcaaaatctcctctggaattcagtaagatacgtgctctaactccc
ttggccaaggtcactgacgtgaagctgtttgctgctatattgtctggtcgcttggaagca
gctgctattgaaccacctgctttcataattacatcctcagagacaacggatgaaactatt
gtggcggattctgacgttgaaactgatactgcaatatctgagcatactgttggtgctagc
aagtctgagcatcatattcagcatatctcagacaataaagcagaaggcaaagttataagc
agtgcgaatgctgcaaatttaggagaagcagaggtcaacactagtattcacgtggatctg
gagaaagacaaaatttcggaatccatggaggaagatgttcaggtcatagagaaaacagca
attccgaggttcaaagctggaggtgaggatgttcaggtcataaacaaggtgctggaggac
gagaacattgacactaccagggaaaagacttctcatgctgtttttgtaaacaaggcgcta
aaggacgagaacttgggcactagcggggaagagacttgtcatgttatttttagtcaaaat
ctgattgtcaaaagggtccttcggccagctcgtgctgcatcagcaaaaactggaggcatt
aacttcaaaagatttaaaaagagggaaaccgtgtctgggaacagcttcagggccctgatt
ccatttgcacgagaaccatacagagagtctgatcaggaaaaaggcaccttaactgatttc
atgagagaggagaagcggcgaaaacaaatggaatccattgcagaggacctcttcaacaat
cagaagccaaagaagaaggcggctgcaggcagttcaattcagaccctactcaccggttgc
cgatga
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