Lolium rigidum (rigid ryegrass): 124708395
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Entry
124708395 CDS
T09103
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124708395
Membrane trafficking [BR:
lrd04131
]
Protein recycling
Others
EARP complex
124708395
Endosome - Golgi transport
Tethering complex
GARP complex
124708395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF7795
Motif
Other DBs
NCBI-GeneID:
124708395
NCBI-ProteinID:
XP_047096025
LinkDB
All DBs
Position
4:complement(132156102..132169038)
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AA seq
689 aa
AA seq
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MAGFQEQRFEELFGGFFFDEDALSEDISLDGLEQELEEHKNYDVLISILANGEKQRDMAT
MVEGNLGDIEQDLIQDYIEDNDSLFLLRDQIHDCDIILSQVGSLLSGFQVHIGSISSEIR
SLQEKSLDLGVRLNNRKLVETKLAAFVEEIVAPPGLVNVIIDGEVNDEYIRSLNILSKKL
RFAQVDPMINASKALKDIKQELERLRRKALSKVSNHITEIFSSMRKPGTNIQILQQNLLQ
KYRYLVFFLKEHGLETYNDVCAAYVDKMNKVLSADFRVYVEALEKLKLDIGVSSDVIGYD
TNIVDLITKGREQLRNHRFMFSLGERSNILKEIDQPGLVPRISEANSLKYPYEVIFRSLQ
KLLMDTASSEYLFIEAFFGEESLFYRVFEGPFTVINEHLKVTLQNFHDAVCLMLMICITK
KHQLVMSNRRLPCLDTYLDKVVIYLWPRFKTVFDMYIHSLYQCDLKILWVDGTHPHHIVR
CYVEFTASLVQLNAECGDGQLDMSLERLRLAVDDLLLRFSGKFATPKLRHLFLLNNYDMS
ISILKEAGDDAKKLQIYFEEKLESSLVSFVDELLMEYFGDLIKFVKSHISEDLISYTEPP
KIADVEPVVKNFAVKWKTALELMHNEVVTCCSNLLSGMAILKAAMAQLLNDYNRLSECVK
MIPGGSSLNRNLVSITTISYEIRKYSRPL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttccaggaacagcgatttgaagaattgtttggtgggtttttcttcgatgaa
gacgccttaagtgaggatatatcattggatgggctggagcaagaacttgaggagcataag
aactacgatgtgctgataagtattctagccaacggtgaaaaacagcgagatatggcaacc
atggtggaaggcaacctaggcgatatcgaacaggatctaattcaggactatatcgaagac
aatgacagcctatttctattgcgtgatcagattcacgactgtgacattatcttatctcaa
gtaggatcacttcttagcggatttcaggtccacattggttctataagctcggaaattaga
agtctccaggagaaatccttggacctgggtgttagactgaacaaccgtaagttggtcgag
acaaagcttgcagcatttgtcgaagaaattgttgctcctcctggtttggtgaatgttatc
attgatggagaggtaaatgatgaatatattaggagtctaaacatattgagcaaaaagttg
agatttgctcaagttgatccgatgattaatgcatcaaaagctctgaaagatattaagcaa
gaactggaaaggcttcggagaaaggcactatcaaaggtgtccaaccatatcactgagata
ttctcttccatgcgaaagcctggaactaatatccaaatactgcaacaaaatctgcttcag
aagtataggtatctcgttttctttcttaaagagcatgggttggagacgtacaatgatgtc
tgtgcagcgtatgttgataaaatgaacaaggtgctgagtgcagatttccgtgtgtacgta
gaagcattggagaagttgaagctagatattggtgtatccagtgatgtgattggatatgac
accaatatcgttgaccttataacaaaggggagagagcagttgagaaatcaccgctttatg
ttttccttaggtgaacggtcaaacattttgaaggagattgatcagcctggtttggtacct
cgtatatctgaagccaactctctaaaatacccatatgaagttatttttaggagtctacaa
aagcttctgatggacactgctagctctgagtatctttttatcgaagcgttctttggcgaa
gaatcattgttttatagagtttttgaaggaccttttacagtaattaatgaacatttgaag
gtcactcttcaaaattttcatgatgcagtatgcctcatgctcatgatctgcataaccaag
aaacaccagttggttatgtccaacaggcggcttccttgtcttgatacatatttggataag
gttgtcatctatctctggccacgtttcaagacagtgtttgatatgtatattcacagcttg
tatcaatgcgacctgaaaatattatgggtggatgggactcatccacaccacattgtaagg
tgctatgtggagttcacagcatcccttgttcagcttaatgctgaatgcggagatggtcag
cttgatatgagcttggaaaggttgcggttagctgttgatgacttactccttagattttcc
ggaaagtttgcaactccgaaactgcgacacctgtttctcttgaataattatgacatgtcc
atctctatcctgaaggaagccggtgatgatgcaaaaaaattgcaaatatattttgaagag
aagctggaaagtagcctggtgtcatttgtggatgaattgcttatggaatattttggtgat
ttaattaaatttgtgaagagccacatttctgaagacctgatttcttacacggagccccca
aaaattgctgatgtggagccagttgtgaagaactttgctgtgaagtggaaaactgctcta
gagctcatgcacaatgaagttgtaacttgttgcagtaatcttttgtctggtatggcgatt
ctaaaagcagcgatggctcagttgcttaatgactacaacagactctcagaatgtgttaag
atgatcccaggtggatcttctttgaacaggaatctggtttctatcaccacgatttcatac
gaaatcaggaaatattcaagaccactctag
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