KEGG   Lolium rigidum (rigid ryegrass): 124708398
Entry
124708398         CDS       T09103                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-2-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03010  Ribosome
lrd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    124708398
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124708398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:lrd03011]
    124708398
   04121 Ubiquitin system [BR:lrd04121]
    124708398
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lrd04147]
    124708398
Ribosome [BR:lrd03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    124708398
  Archaea
    124708398
Ubiquitin system [BR:lrd04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   124708398
Exosome [BR:lrd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124708398
  Exosomal proteins of colorectal cancer cells
   124708398
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 IBR Dsc3_N DUF2604 TBK1_ULD UBL_UBAC1 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 124708398
NCBI-ProteinID: XP_047096028
LinkDB
Position
4:complement(134961111..134961743)
AA seq 166 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYSTPKKLHHEHKKTELAVLGHYRVDDATGKVERLRK
ECPNPDCGAGTFMAAHADRHSCGKCGLTYAYASASASEFQNPEVDN
NT seq 501 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacgctgacggggaagacgatcacgctggaggtggagtcgtcg
gacacgatcgacaacgtgaaggccaagatccaggacaaggaggggatcccgccggaccag
cagcggctcatcttcgccgggaagcagctggaggacggccgcacgctcgccgactataac
atccagaaggagtccacgctgcacctcgtgctccgcctccgcggcggcgccaagaagcgc
aagaagaagacctactccacgcccaagaagctccaccacgagcacaagaagactgagctc
gccgtgctgggacactaccgggtggacgacgccacgggcaaggtcgagcgcctgcgcaag
gagtgccccaacccggactgcggcgccgggaccttcatggccgcgcacgccgaccgccac
tcctgcggcaagtgcggcctcacatacgcctacgcctccgcctccgcctccgagttccag
aacccggaggttgataattga

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