Lolium rigidum (rigid ryegrass): 124708684
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Entry
124708684 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124708684
04121 Ubiquitin system [BR:
lrd04121
]
124708684
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124708684
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124708684
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124708684
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-Nse
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
124708684
NCBI-ProteinID:
XP_047096312
LinkDB
All DBs
Position
4:complement(38047406..38048902)
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AA seq
384 aa
AA seq
DB search
MDTSPAATAAPASYWCYSCDRFVRAAAAPDVACPGCGGGFLEEMTAPPPTRATSNPYLRR
PRAHHANDLRLRRSRRNASSTASASSAAPFNPVIVLRRSAAGDADADAALAGSSFELFYD
DGAGSGLRPLPETMSDFLMGSGFERLLGQLAQIEAGAVTRARETPPASKAAVDSMPTVPI
AAAHVRADCHCAVCKEPFEVGAEAREMPCKHIYHEGCILPWLQLRNSCPVCRHEMPTDSM
PTDPARSHPTEEETTVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNNGGA
PRRISWGSRQSRSTETSAIRRVFRNMFACFGRGSSSSSQASSAQMRPDEINEGSDHSAVF
SQGSRSRSMSWRLEDGHADAMVQR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggacacctcccccgccgccaccgcggcgccggcctcctactggtgctacagctgcgac
cgcttcgtgcgcgccgcggcggcgccggacgtcgcgtgcccgggctgcggcggcgggttc
ctcgaggagatgacggcgccgcctccaacccgcgccacctccaacccctacctccgccgc
ccgcgcgcgcaccacgccaacgacctgcgcctccgccgcagccgccgcaacgcctcctcc
accgcctccgcctcctccgccgcgccgttcaacccggtcatcgtgctgcgccgctccgcg
gcgggcgacgccgacgccgacgccgcgctcgccggcagcagcttcgagctcttctacgac
gacggggcgggctcgggcctgcgcccgctgcccgagaccatgtccgacttcctcatgggg
tccggcttcgagcggctgctcggccagctcgcccagatcgaggcgggcgccgtgacgcgc
gcccgcgagaccccgccggcctccaaggcggccgtggactccatgcccacggtccccatc
gccgccgcccacgtccgcgccgactgccactgcgccgtctgcaaggagcccttcgaggtc
ggcgccgaggcccgggagatgccctgcaagcacatctaccacgagggatgcatcctgccc
tggctgcagctccgcaactcctgccctgtctgccgccacgagatgcccaccgactccatg
cccaccgacccagctcgctctcacccgaccgaggaggagacgacggtcgggctcaccatc
tggaggctgccgggaggcgggtttgccgtggggaggttcgcaggcgggaggcggcccgag
gagagggagctcccggtcgtgtacacggagatggacggcggtttcaacaatggcggcgct
ccccggaggatctcgtggggctcgcggcagagccgatcaacggagaccagcgccatcaga
cgcgttttccgcaacatgtttgcgtgctttggccgtgggagttcgtcgagctctcaggcc
tcctctgcgcaaatgaggcccgatgagataaatgaggggtcggatcattccgccgtgttc
agccagggctcgaggagccggagcatgagctggaggttggaagatggccacgccgacgcc
atggtgcagagatag
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