Lolium rigidum (rigid ryegrass): 124708857
Help
Entry
124708857 CDS
T09103
Name
(RefSeq) tRNA pseudouridine synthase B-like
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124708857
Enzymes [BR:
lrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
124708857
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124708857
Prokaryotic type
124708857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
124708857
NCBI-ProteinID:
XP_047096455
LinkDB
All DBs
Position
4:38811860..38816345
Genome browser
AA seq
388 aa
AA seq
DB search
MVELRPEVVDFPRLHAREEALYFHDAFAMPWEKDKHYRMLYRLEKKYFPDQSLDKAFVAA
DHAAPPSGADAEDKGLVFFEEEKEADVEEVCKKDKGEVLERKVEEFFKSLKKGPAAGEAD
ASTAKKKTTGSGGEPRQVKRSAGGEDDWPRPHLASRRTELPPRWDGPTGTVVLVDKPKGW
TSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMVKGYSGVFRLG
EATSTWDADSPVIQRESWEHIKDEDIRKAAASFMGEIWQVPPMFSAIKVGGEKMYDKARR
GETVELSPRRISIYKFDIERSLEDRQNLIFRVTCSKGTYIRSLCADLGKALRSCAHLTAL
RRDSIGDYSVNDAWNFDELEEQITKGYL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggtggagctgcggccggaggtggtcgacttcccgcgcctgcacgcgcgcgaggaggcg
ctctacttccacgacgccttcgccatgccctgggagaaggacaaacactaccgcatgctc
taccgcctcgagaagaagtacttcccggaccagtccctcgacaaggccttcgtcgccgcc
gaccacgccgcgccgccctccggcgccgacgctgaagacaaggggctcgtcttcttcgag
gaagagaaggaagccgatgtggaggaggtctgtaagaaggacaagggggaggtgctggag
aggaaggtggaggagttcttcaagtccttgaagaaaggacctgcggctggagaagctgac
gcttcgacggccaagaagaagacgacggggtcagggggcgagccaaggcaggtgaagcgg
agtgcaggaggggaagatgactggccgcggccgcacctcgcgagcaggaggacggagctg
ccgcctcgatgggacgggccaaccgggaccgtcgtgctcgtcgacaagcccaaaggttgg
acttcatttactgtttgtggaaaactgcggcgattagtgaaagtgcaaaaggttgggcat
gcgggtactctggatcctatggcaacaggattgttgattgtttgtgtgggcaaagcaacc
aaagttgttgacagataccaaggaatggttaaaggctatagtggtgttttccgacttgga
gaagcaacatctacctgggatgcagattcaccagttattcagagggaatcatgggaacac
atcaaagatgaagatattagaaaggcagcagcatcattcatgggtgaaatatggcaagtt
cctccgatgttttctgccattaaggttggcggtgaaaaaatgtatgacaaagcaaggaga
ggtgaaacggtagagctttcacctagacgtatatccatatataagtttgatattgagcgc
agtttagaagacaggcaaaatttgatatttcgagttacttgctcgaaaggaacgtacatt
cggtccctctgtgcagacttgggaaaagcacttcgaagctgtgctcatttaactgcactg
cggagagactcaattggtgactattctgtcaacgacgcttggaacttcgatgaactagag
gaacaaattaccaagggatatttatga
DBGET
integrated database retrieval system
