Lolium rigidum (rigid ryegrass): 124708861
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Entry
124708861 CDS
T09103
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17-like
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124708861
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124708861
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124708861
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124708861
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Helicases
124708861
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
UvrD-helicase
DUF7533
Motif
Other DBs
NCBI-GeneID:
124708861
NCBI-ProteinID:
XP_047096457
LinkDB
All DBs
Position
4:50743579..50747338
Genome browser
AA seq
610 aa
AA seq
DB search
MAAKRKLGKSPAQAPAPAKKAKEEDAEEGLFSSRSFADLGLHPTLCSHLQDKMGFQAPTR
IQAQAIPVAMSGQHLLVKAATGTGKTLAYLAPIVHLLQMREPRVERTHGTFALVIVPTRE
LCLQVYGIAQQLVHRFHWLVPGYVMGGESRSKEKARLRKGISILIATPGRLLDHLQHTSS
FVYSNLRWIVFDEADSILELGFGKAVEDILGLLGSRTDASGQNKSKTDHVQRQNLLLSAT
LNEKVNRLANISLKNPVMIGLDEQNKPSERSRALGKKHTSLLSDDEEEIPVKHNYMVQHA
VDDFKLPAQLIQRYVKVSCGSRLAVLLTILKSQFERQVSQKVVVFLSTCDSVDFHHTVLS
QLEWSRGLALDAENKQKFLSCKVFRLHGSMDQEDRKKSYLGFSTEKSAILVCTDVAARGL
DIPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPVEIDYLRDLELHGVSLTE
YPFQKVLDGFPLNGEKPLKRKPISLDMHPWILSVQRTLENYIASEATANKLARDAFCSWL
RAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLVGRSHQVQLKKRKKEQKRERPNNN
NKRRKLHAKK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaagaggaagctcggcaagtcgccggcgcaagcgccggcgccggcgaagaaa
gcgaaggaagaggacgcggaggaggggctcttctcttcgcgctccttcgccgacctcggc
ctccaccccaccctctgctcacacctccaagacaagatgggtttccaggcaccgacgcgg
atccaggcgcaggcgattccggtcgccatgtcagggcagcacttgctggtcaaggcggcg
actggtaccggcaagacgcttgcgtaccttgcgccgatcgttcaccttctccagatgagg
gagcctcgtgtcgagaggacccatggaacttttgcgttggtgattgttccaacgcgagag
ctgtgcttgcaggtttatgggattgcgcagcagttggtgcatcgtttccactggcttgtc
cctgggtatgtgatgggcggtgagagtagatcaaaagagaaagcaaggctacggaaaggg
atatcaattcttattgctactcctgggcgcctgctggaccacttacaacatacttcctca
tttgtttattcaaatttgcgctggatagtttttgatgaagctgacagcattcttgaactt
ggttttggaaaagcagtcgaggatatactaggcctcttgggttccagaactgatgcttct
ggccagaataaaagcaaaacagaccatgtgcaaaggcaaaaccttctcttatcagcaact
ctcaacgaaaaggtgaaccgcttagccaacattagtttgaagaacccagtgatgattgga
cttgatgaacaaaataagccttctgagaggtccagagccctagggaagaagcacacttcc
ttattatctgatgacgaggaggaaatacctgtaaagcacaattatatggtgcaacatgcg
gttgatgattttaagcttcccgcacaattgattcaaagatatgttaaagtttcatgtggt
tcgaggcttgcggttcttcttaccattctgaaatctcaatttgaaagacaagtgtcccag
aaggttgtcgttttcttgtcaacatgtgactctgtagatttccatcacactgttctcagc
cagcttgagtggagccgtggccttgcactagatgcggaaaataagcaaaagtttcttagc
tgtaaagtattccgtttacatggtagcatggaccaggaggatagaaagaaatcatacttg
ggattcagtactgaaaaatctgcaattcttgtatgcactgatgttgctgctaggggtttg
gacattccgaaagtgaaatgcatcatacagtatgactcacctggggaggcttctgaatat
gttcacagggtcggaagaactgcaaggattggtgaaaagggggaggccctcctgtttctc
caacctgttgaaatcgattacttgagagatctagagctacacggcgtatctctgacagaa
taccccttccaaaaggttttagatggtttccctttaaatggagagaagcctctcaagagg
aagcctatatctttggatatgcacccatggatactctctgtgcagagaacgctggaaaat
tacatcgcatcggaggccacagcaaacaagcttgcgagggacgccttctgttcatggctc
cgtgcttacaccgcccaccgaggcgaactgaagaagattttcatggtcaagaagctccac
ctgggacatgtcgcgagaagctttgggttgaaggagcaaccctcgctggtcggaaggtca
caccaggtgcagctcaagaagaggaagaaagaacagaaacgtgagaggcctaacaacaac
aacaaaaggagaaagctccatgctaagaagtga
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