Lolium rigidum (rigid ryegrass): 124708897
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Entry
124708897 CDS
T09103
Name
(RefSeq) PWWP domain-containing protein 1-like isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00270
Cysteine and methionine metabolism
lrd01100
Metabolic pathways
lrd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
124708897
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124708897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124708897
03032 DNA replication proteins [BR:
lrd03032
]
124708897
03036 Chromosome and associated proteins [BR:
lrd03036
]
124708897
Enzymes [BR:
lrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
124708897
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124708897
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
124708897
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124708897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
124708897
NCBI-ProteinID:
XP_047096492
LinkDB
All DBs
Position
4:67408503..67416356
Genome browser
AA seq
1011 aa
AA seq
DB search
MTDPAAAGSGSGAVVPMGGISEDWTPSFGDMVWGKVKSHPWWPGHVYSITLSDDPEVHRG
HRHGLVLVAFFGDGSYGWFEPHELVRFEDHFVEKTSQGGSRTFPAAVAESLDEIARRSAL
ALLCPCRGPDTFRPHKEDAGILLVNVPGFDSNAEYLPDQVTAARDKFVPQTMLDFLQSAA
VEQRDAAETAARTLPGIEMAAMLMAYRRTRFEKYDLTYAESFGVEPKKALEGEIKAEAER
SQRARPLKGRQRVPEKENAPAAKGRRGAAGAAARLMEKIVPGAPAIKLKASKKDQYLLKR
RDDARAPALPPAVLPDATPVPDDGGPPPGFPSAEPQTPPLPSSAGGGDDEEFMLQKRAPT
GQASDGGATADDDVAAGTVPKKAAKPKKARKREREGAAEATADESAAAGEPKTKKKKKKL
AELNSGAPSANPSGGGAKPAAFSPPKVDLDGLDLKQVISDLENLPLLPSYGAGRSISDGS
HSFLLAFRSKHYKKSYENDPSEESKKSLDTKPNAAVAAAAAAAVDGQPPKPVKKKPVMRP
IDPSIAGVKRGPSDRQEEMATKKKIKLEKIKTLAAEKKAGLEQKVVPAPASAVGGVTPAA
QQPRAGMKEKAQGLVKKKVPAAAPARRMASPTALMMKFPPNSTLPSVASLKARFARFGPL
DIDGIRVYWKSYMCRVIYKYKSDAEMALKSAKSTAMFGQVVPNYHLRGIESSSAGADMGP
EPAPPAQQRSELRLMETTPFRPGSSGNGAPLTLSRAAPARAVVGQPKSILKKNNDDGGAS
ALRDSPRVKFMLDGGDSKLEPPAIPASGNSPDAAAPVSKVARSVGFAQPPLQPLARPAQP
NLQPAMRAQQQQLQPPRALDTQALPPPPPLPYQPRVSEPLPYQPRLSEASPYQPRHTDAP
PSFNNMQPPYQARHIDVPLMLSGQTTLPYPPRASFARSDDMPPPSHFDNNAANAMPAPFD
RNAVNAMPVWKRGEKEFSEELMRVMLAIAKLVEPLMDKNGNFPYHLFGRSA
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccgccgccgccggctccggctccggcgccgtcgtgcccatgggcggaatc
agcgaggattggacccccagcttcggcgacatggtctggggcaaggtgaagtcgcatccg
tggtggcccggtcacgtctacagcatcaccctctccgacgacccggaggtgcaccgcggc
caccgccacggcctcgtcctcgtcgccttcttcggcgacggcagctacgggtggttcgag
ccgcacgagctcgtccgcttcgaggaccacttcgtcgagaagacgtcgcagggcggcagc
cgcaccttccccgccgccgtcgccgagtccctcgacgagatcgcgcgccgcagcgcgctc
gcgctcctctgcccctgccgcggacccgacaccttccgcccccacaaggaggacgccggg
atcctcctggtgaacgtacccggcttcgactccaacgccgagtacctccccgaccaggtg
acggccgcgcgggacaagttcgtcccgcagacgatgctggatttcctgcagagcgccgcc
gtggagcagcgggatgctgccgagacagccgcacggactttgccagggatcgagatggcc
gcgatgctcatggcgtaccgccggaccagattcgagaagtacgacctcacctatgcagaa
tcatttggggtggagccaaagaaggcgcttgaaggagagattaaagccgaggctgaacgg
tctcaacgagctcggccgctcaagggccggcagagggtgccggagaaggagaacgccccg
gcagccaagggccggaggggcgccgccggcgcggcggcgaggctcatggagaagatcgtg
cccggcgcgccggccatcaagctcaaggccagcaagaaggaccagtacctgctcaagcgc
cgggacgacgcccgcgctccggcgctgccgccggcagtgctcccggacgcgacccccgtt
ccggacgacggcggcccgccgcctggcttcccgtcggcggagccgcagacgccgccgttg
cccagcagtgccggaggcggcgacgatgaggagttcatgctgcagaagcgcgcgccaacc
ggccaagcgagcgacggcggcgcaaccgcggacgacgacgtcgccgccggcaccgtgccc
aagaaggcagcgaagcccaagaaggcccgcaagcgcgagagggagggggcggcggaagcc
accgccgacgagtccgccgctgccggcgagccaaagacgaagaagaaaaagaagaagctc
gcggagctcaacagcggcgcgccctctgccaacccctccggcggcggcgcaaagccagcc
gctttctcgccccccaaggtcgacctcgatggcctggatctgaaacaggtaatatcggac
cttgagaacctcccgctgcttccctcctacggcgccggcagatccatctctgacggatct
cactccttcctcctcgccttccgctcgaaacactacaagaagagttatgagaacgatcct
agcgaggagtccaagaagagtctggatactaaacccaatgccgccgtcgctgccgctgcc
gctgccgctgttgacggccagccgcccaagccggtcaaaaagaagcccgtcatgagaccc
attgaccccagcattgccggcgtgaagcgcgggccctctgaccggcaggaggagatggcc
accaagaagaaaataaagctcgagaagattaagacactggcagccgagaagaaggccggg
ctggagcagaaagtcgtccctgcccctgcctcagctgtgggaggcgttacgccggcggct
cagcagccacgtgctggcatgaaggagaaggctcagggattagtcaagaagaaggtgcca
gctgcggcgccggcgaggaggatggcgtcgccgacggcgctgatgatgaagttcccgccc
aatagcacgctgccgtcggtggcctccctcaaggctaggttcgcgcgcttcgggccgcta
gacatcgacggcatccgggtgtactggaagtcctacatgtgccgggtcatctacaagtac
aagtccgacgccgagatggcgctcaagtcagccaagtccacagccatgttcggccaggtg
gtccccaactaccacctccgtggcatcgagtcgtcgtcggccggcgctgacatggggcct
gagccggctcctcctgcgcagcagcgctccgagttgcggctcatggagaccacgccgttc
aggcctgggagctctggcaatggcgctcctctaacgctgtcaagggcggcgccagcgcgc
gcagtcgtcgggcagcccaagtcaatcctcaagaagaacaacgacgatggtggggccagc
gcgctccgggactcccctcgggtgaagttcatgttggacggtggcgacagcaagctcgag
ccacctgcgattccggcgagcggcaatagcccggacgctgctgcaccggtgagcaaggtc
gcgaggtcggtcggcttcgcacagccgcctctacagccactggcacgccctgcacagccc
aacctgcaaccggccatgcgtgcacagcaacagcagctgcagcctccacgcgcactggat
acccaggcacttccaccgccaccgccgctgccgtaccagcctcgtgtcagtgagccgttg
ccgtaccagcctcgcctcagcgaggcatcaccataccagccccgtcacacagacgcgccg
ccatctttcaacaacatgcagccgccgtaccaggctcgccacatcgacgtgccgctcatg
ctctctggacagacgacgctgccatacccgcctcgtgccagctttgcccgctccgacgac
atgccgccgccatctcactttgacaacaatgcagccaacgccatgccggctccttttgac
aggaacgctgtgaacgccatgcccgtgtggaagaggggagagaaggagttcagtgaggag
ctgatgagggtgatgctggcgatcgccaagctggtggagccattgatggacaagaacggc
aacttcccctaccacctcttcggcaggtcagcttga
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