Limosilactobacillus reuteri subsp. reuteri DSM 20016: Lreu_0354
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Entry
Lreu_0354 CDS
T00535
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lre
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Pathway
lre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lreu_0354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lre03019
]
Lreu_0354
03110 Chaperones and folding catalysts [BR:
lre03110
]
Lreu_0354
03029 Mitochondrial biogenesis [BR:
lre03029
]
Lreu_0354
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lre04147
]
Lreu_0354
Enzymes [BR:
lre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Lreu_0354
Messenger RNA biogenesis [BR:
lre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Lreu_0354
Chaperones and folding catalysts [BR:
lre03110
]
Heat shock proteins
HSP60 / Chaperonin
Lreu_0354
Mitochondrial biogenesis [BR:
lre03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Lreu_0354
Exosome [BR:
lre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Lreu_0354
Exosomal proteins of other body fluids (saliva and urine)
Lreu_0354
Exosomal proteins of breast cancer cells
Lreu_0354
Exosomal proteins of colorectal cancer cells
Lreu_0354
Exosomal proteins of bladder cancer cells
Lreu_0354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SurA_N
Motif
Other DBs
NCBI-ProteinID:
ABQ82623
UniProt:
A5VIE9
LinkDB
All DBs
Position
401807..403435
Genome browser
AA seq
542 aa
AA seq
DB search
MAKEIKFSEDARSAMLSGVDKLADTVKTTMGPKGRNVVLEQSYGTPTITNDGVTIAKSIE
LENQFENMGAKLVAEVASKTNDIAGDGTTTATVLTQAIVNAGMKNVTSGANPVGIRRGID
KATEVAVEALKKMSHDVKTKDDIEQIASISAANPEVGKLIADAMEKVGHDGVITIEDSRG
VDTSVDVVEGMSFDRGYMSQYMVTDNDKMEADLDNPYILITDKKISNIQDILPLLQSVVQ
EGRALLIIADDITGEALPTLVLNKIRGTFNVVSVKAPGFGDRRKAQLQDIAVLTGGTVIS
DDLGMSLKDATVDQLGQANKVTVTKDTTTIVDGAGSKEAIQERVDQIKQEIAKSTSDFDK
EKLQERLAKLSGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALINV
IPALDKIEADGDELTGINIVKAALEAPVRQIAENAGVEGSVIVNELKNEKEGIGYNAADG
KFEDMIKAGIVDPTMVTRSALQNAASVSALLLTTEAVVADKPDPNANNQAPAAPQGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaagttttctgaagatgcacggagcgctatgctcagtggtgttgat
aaattagctgatactgttaagacaacgatgggtccaaagggacggaatgttgttttggaa
caaagctatggcacaccaactattactaatgatggtgtaactattgctaagagcattgaa
cttgaaaaccaatttgaaaatatgggtgcaaagttagtagccgaagttgcttcaaagacc
aacgatattgccggtgatggtactacaactgctactgttttaactcaagcaattgttaat
gctggtatgaagaacgttacctctggtgcaaacccagttggtattcgtcgtggtattgac
aaggctaccgaagttgctgttgaagctttgaagaagatgtcacacgatgtaaagacaaag
gatgatatcgaacaaatcgcttctatttcagctgctaatccagaagttggtaagttaatt
gctgatgcaatggaaaaggttggccatgatggtgtaattactatcgaagattctcgtggt
gttgacactagcgttgatgttgttgaaggaatgagctttgatcgtggttacatgtcacaa
tacatggtaactgataacgacaagatggaagcagaccttgacaacccatatattttgatt
actgacaagaagattagtaatatccaagacattttgccattgcttcaatcagttgttcaa
gaaggccgtgctctcttgatcattgctgatgacattactggtgaagcattaccaactctt
gtattgaacaagattcgtggtacctttaatgttgtttctgttaaggctcctggctttggt
gaccgtcgtaaggctcaacttcaagatattgctgttttgactggtggtacagttatttct
gacgaccttgggatgagtctaaaggacgctactgttgatcaattaggtcaagcaaacaag
gttacagttacaaaggatactactactatcgttgatggtgctggttcaaaggaagctatc
caagaacgtgttgaccaaattaagcaagaaattgctaagtcaacttccgacttcgataag
gaaaagcttcaagaacgtcttgcaaagctttcaggtggggttgccgttgttaaggttggt
gccgcaactgaaactgaattgaaggaaaagaagtaccggattgaagatgccttgaacgct
actcgtgctgctgttcaagaaggatttgttcctggtggtggaactgctttaattaacgta
attcctgctcttgacaagattgaagccgatggtgatgaattaactggtatcaatattgtt
aaggctgcccttgaagcaccagttcgtcaaattgctgaaaacgctggtgttgaaggctct
gttattgttaatgaattaaagaatgaaaaagaaggcattggttacaacgctgcagatggc
aagtttgaagatatgatcaaggctggtattgttgacccaacaatggttacccggtctgct
cttcaaaacgctgcttccgtatcagcattgcttcttactactgaagcggttgttgctgat
aagccagatccaaatgctaataaccaagctcctgctgctccacaaggcggcatgggcggt
atgatgtaa
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