Limosilactobacillus reuteri subsp. reuteri DSM 20016: Lreu_0386
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Entry
Lreu_0386 CDS
T00535
Name
(GenBank) uncharacterized P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
lre
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Brite
KEGG Orthology (KO) [BR:
lre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lre03019
]
Lreu_0386
Messenger RNA biogenesis [BR:
lre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Lreu_0386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
nSTAND3
AAA_18
AAA_28
AAA_22
Myosin_head
nSTAND_NTPase5
NB-ARC
CoaE
Motif
Other DBs
NCBI-ProteinID:
ABQ82655
UniProt:
A5VII1
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All DBs
Position
438605..439498
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AA seq
297 aa
AA seq
DB search
MRKEELVMVDKKLKVVIITGMSGAGKTVAVHSLEDLGYFVIDNMLPGLAERFVDVIEDSR
EFDKIAMVMDMRSRGFYDEVLPNFEKLKKRADLDVKLLFLDANDVTLISRYKETRRSHPL
SPQGRILDGVELERKLSTDLKSQADIVIDTTNVTPRNLKLRLNKLFGHGEGNDFYVEVMS
FGFKYGLPLDADIVMDVRFLPNPFYIPELKHLTGNDPAVQNYVMQSPLAKEFYQHLRSLL
EIALPGYIKEGKSSLTIAIGCTGGQHRSVTIANKLSADLKEKGYKVNTYHRDIEKAK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagaggaactagtgatggtagataaaaaattaaaagtagtaattattacaggg
atgagtggtgcggggaaaaccgttgccgttcatagcttagaagatttaggatatttcgta
attgataacatgcttcctggattggcagaacgttttgttgatgtgatagaagattcgaga
gagtttgataaaatcgccatggtaatggatatgcgttcacgcggattttacgatgaggtt
ttaccaaactttgaaaaactgaaaaaacgagctgatttagatgtgaaactactcttctta
gatgctaatgacgtcacgttaatttcacgttataaggaaacaagacgttctcacccctta
tctccacaaggtcggatacttgatggagtagaattagaacggaagctttcaaccgatctt
aagagccaagcagatatagtaattgataccactaatgtgacaccacgaaatctaaagtta
aggcttaataaattattcggacatggtgaaggtaatgacttttatgttgaagtaatgtcg
tttgggtttaaatatgggttgccacttgatgcggatatcgtaatggatgttcgtttcctt
cctaatccattctatattccagaattaaagcacttaacgggaaatgatccagctgttcaa
aattatgttatgcagagtccgctggctaaggaattttaccagcatttacggtcgctctta
gagattgctcttccaggttacattaaggagggaaagagcagtttgacaattgcaattggg
tgtacgggtggtcaacatcggtcagtaactattgctaataaattatccgctgatttaaaa
gaaaaaggatataaagtaaatacttaccatcgcgatattgagaaggcaaagtaa
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