Limosilactobacillus reuteri subsp. reuteri DSM 20016: Lreu_0397
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Entry
Lreu_0397 CDS
T00535
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lre
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Pathway
lre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lreu_0397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lre03400
]
Lreu_0397
Enzymes [BR:
lre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Lreu_0397
DNA repair and recombination proteins [BR:
lre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Lreu_0397
Prokaryotic type
Lreu_0397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
ABQ82666
UniProt:
A5VIJ2
LinkDB
All DBs
Position
451241..451930
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AA seq
229 aa
AA seq
DB search
MKQLIHNDWWEVLKPQFESAYYAQLHNFLKEEYTHQTIYPEMHHIFEAFEWTPFSKVKVV
ILGQDPYHGPNQAHGCSFSVLPGVPVPPSLQNIYKELQSDLGCTPVNHGYLKKWADQGVL
LLNSVLTVRAGQAYSHRGHGWEQLTDAAIHALSERPKPVVFILWGRAARNKKQLINTKTN
IVLESAHPSPLSANRGFFGSRPFSKTNEALQAMGEQPIDWQLPAEPNYR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaattaattcataacgactggtgggaagttttaaagccccagtttgaaagtgcg
tattatgcgcaattgcataatttcctaaaagaagaatatacccatcaaacgatctatcca
gaaatgcatcatatttttgaagcatttgaatggactccttttagtaaggttaaagttgtt
atccttggtcaagatccttatcatggaccaaaccaagctcatgggtgtagtttttcagta
ctgcctggggtaccggtcccgccttcattacagaatatttacaaagaattgcaaagtgat
ttaggttgtacaccggtaaatcacggctatttgaagaaatgggctgatcaaggtgtcctg
ttgttaaattcggttttgacagtacgagcagggcaagcatattctcaccgtggacatggc
tgggagcaattaacagatgcggcgattcatgctttatctgaacgtcctaaaccagtggtg
ttcatcttgtggggacgagctgctcgaaataagaaacagttaattaatacgaagacaaat
atcgttcttgaatcagctcacccgagtccattatctgctaaccgtggattctttggttct
cgaccattttctaaaacaaacgaagcacttcaggcaatgggagaacagccaattgattgg
caactgcctgccgaaccaaattatcgttaa
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