Limosilactobacillus reuteri subsp. reuteri DSM 20016: Lreu_0646
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Entry
Lreu_0646 CDS
T00535
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lre
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Pathway
lre03030
DNA replication
lre03430
Mismatch repair
lre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lreu_0646
03430 Mismatch repair
Lreu_0646
03440 Homologous recombination
Lreu_0646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lre03032
]
Lreu_0646
03400 DNA repair and recombination proteins [BR:
lre03400
]
Lreu_0646
Enzymes [BR:
lre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lreu_0646
DNA replication proteins [BR:
lre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lreu_0646
DNA repair and recombination proteins [BR:
lre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lreu_0646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ABQ82911
UniProt:
A5VJ87
LinkDB
All DBs
Position
714518..715549
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AA seq
343 aa
AA seq
DB search
MDIAQLSTQLKTKTPAMVYLILGKQQVLQQQAIDAFTSLIPENEQVMNVGRYDMEATPLA
VALDDAMATPFFGERRLVIINKPFFLTGEKRHSKVEHDLDSLKKYLEHPEPSTILVFTAP
YEKLDGRKGIVKQLKKTAVLVDASPLDERAARQRVRTQLSTAGFEISEAALDELVQRTNA
DYGMMDASLTKLKILAYHEKKIDQNMVAALVPQSLDENVFDLVTAVLKHNQIKALDLYQQ
LLAGQQPPLRINAVLVGQFRLLIQIKVLSKRGLTQGSLASQLNVHPYRIKLGLKTARDFS
MQALENAYLGLIRIEQSLKTTQRDPSLLFQLFMLQYSQQSKGA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttggacattgcccaattatctacacaattaaaaactaaaaccccagcaatggtatatttg
attttaggaaaacaacaggttcttcaacagcaggcaattgatgcctttacaagccttatt
ccagagaatgaacaggtcatgaatgttggtcgatatgatatggaagccacgccgttggca
gttgctttggatgatgcgatggcgactccattttttggtgaacgacgattagttattatc
aataaaccgttcttcttaactggtgagaaaaggcattcgaaagttgagcatgatttggat
agcttaaaaaagtatcttgaacaccctgaaccgtctacaattttagtttttacggcccct
tatgaaaagcttgatggacgaaaagggattgtaaagcaattaaagaagacagcagtttta
gttgatgctagtccacttgatgaacgagcagctcgtcaaagagtgagaactcaattatca
actgctgggtttgaaatatcagaagctgctttggatgagttggttcaacggactaatgcg
gattatgggatgatggatgcaagcttaactaaattaaagattttggcttatcatgaaaaa
aagattgatcaaaacatggtagccgctttagttccgcaatcattagatgaaaatgtattt
gatttagtcactgcggttcttaagcataatcaaataaaggccttagatctctatcaacag
ctattagcaggtcagcaaccaccgttaaggattaatgcggtgctagtggggcagtttcgg
ttgttgattcaaataaaagtattaagcaaacgcggccttacgcaagggagtctagcaagt
caacttaatgtccatccttatcgaattaaattgggattaaagactgcacgtgatttctca
atgcaggcgttagaaaatgcctatttgggattaattcgtattgaacaatcgttaaaaacg
acacagcgcgatccatcacttttatttcagttatttatgttacagtattctcagcagagc
aaaggggcatga
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