Limosilactobacillus reuteri subsp. reuteri DSM 20016: Lreu_1175
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Entry
Lreu_1175 CDS
T00535
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lre
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Pathway
lre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Lreu_1175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lre03021
]
Lreu_1175
03400 DNA repair and recombination proteins [BR:
lre03400
]
Lreu_1175
Enzymes [BR:
lre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Lreu_1175
Transcription machinery [BR:
lre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Lreu_1175
DNA repair and recombination proteins [BR:
lre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Lreu_1175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Dbr1_C
Motif
Other DBs
NCBI-ProteinID:
ABQ83432
UniProt:
A5VKQ8
LinkDB
All DBs
Position
complement(1230402..1230620)
Genome browser
AA seq
72 aa
AA seq
DB search
MILFPSVDELLKHIDSRYSLVMLASKRANELDAGAAPLLEHYDSSKSVGKALEEILAGKV
TIDPDHTEDLQD
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgatcctttttccatcagttgatgaattattaaaacatattgattctcgttattcatta
gttatgcttgctagtaagcgtgccaatgaattagatgcaggagctgccccattacttgaa
cattatgattcaagcaaatcagttgggaaggcccttgaagagattttggctggaaaagtt
acgatcgatcctgatcatactgaagacttacaggattaa
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