Limosilactobacillus reuteri subsp. reuteri DSM 20016: Lreu_1183
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Entry
Lreu_1183 CDS
T00535
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lre
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Pathway
lre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Lreu_1183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lre03400
]
Lreu_1183
Enzymes [BR:
lre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Lreu_1183
DNA repair and recombination proteins [BR:
lre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Lreu_1183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
COG5_N
Beta-barrel_RND_rel
BLOC1S3
RecJ_OB
DUF4347
Motif
Other DBs
NCBI-ProteinID:
ABQ83440
UniProt:
A5VKR6
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All DBs
Position
complement(1236177..1237514)
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AA seq
445 aa
AA seq
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MDRSQYLTVSELTKYLKMKFDRDPYLHTVYLTGELSNFRLRQKHQYFSLKDDNAVIDAVM
FEHQFRKIKFTPEQGMKVCVVGHVSLYEKSGRYQIYIDRMEPDGLGSLYLAFEQLKKKLS
AEGLFNLPKKQIPMFPKRIAVVTSIDGAVIRDINTTVRRRYPIAQVVLYPTVVQGDKAAA
DIARQINRANDRGDFDTLIIGRGGGSMEDLWPFNEEVVARAIANSKIPVISSVGHETDTT
IADLVADQRAATPTAAAELATPVKLNDALMTLKDDQNRLLNTMRTKINFDRQQLNKQLQS
YIFQQPTRLYENYAQKVDQLTQQLGQAAQNKMQELQMNVERLSGRLTAASPLHRVQQQEQ
LVDQLKKQLVTASLASQNEKKQQVTTLIKQLDSLSPLKIMSRGYTYVTSDEKVVNHASQL
TVGQNVHLHFDDGEVQAEIKKVKEH
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagccagtatttaacagttagtgaattaactaagtatttgaaaatgaagttt
gaccgggatccatacctacatacggtttatttaaccggtgagctttctaattttcgttta
cggcaaaagcatcagtattttagtttaaaagacgataatgctgtgatcgatgctgtaatg
tttgagcatcaattccggaaaattaaatttactcctgaacaggggatgaaagtttgtgta
gtcggtcatgtaagcttgtatgaaaaaagtggtcgctaccagatttatattgatcggatg
gagccagatggtctgggctctttatacttagcgtttgaacaactaaaaaagaaattgagc
gctgaaggtctatttaatttacctaaaaaacagatcccaatgtttccaaaacgaattgca
gttgttactagtattgatggggcagttatccgggatattaatacgactgttcgacgccgt
tatccaattgctcaagttgttctatatcctactgttgttcaaggagataaggcagcggcg
gatattgctagacaaattaaccgtgccaatgaccgcggcgactttgatacccttattatc
ggtcgaggtgggggatcaatggaagacttatggccttttaatgaagaagtagttgcccgt
gcaattgccaatagcaaaattccggtaatttcatcagttggtcacgagacagatacaaca
attgccgacctcgtagctgatcaacgcgcagcaaccccaactgctgctgctgaattagca
acgccggtaaaactaaacgatgcattaatgacacttaaagatgatcagaatcgtttatta
aatacgatgcggactaaaattaattttgaccgccaacaattgaataaacagctgcaaagc
tatatttttcagcaaccgacaagattatatgaaaattatgcgcaaaaggttgaccaatta
actcaacagttaggtcaagcagcgcaaaataaaatgcaagagctacaaatgaacgtggaa
agattaagtgggcgtttaacggcggcttctccactgcatcgggttcaacaacaagaacag
ttagttgatcaattaaaaaaacaattggttacagcctcacttgccagccaaaatgaaaag
aaacaacaagtgacaactcttattaaacaattagattcactgagtccccttaaaattatg
agtcggggatatacgtatgtaacgagtgatgaaaaggttgttaatcatgccagtcaatta
acggttgggcaaaatgttcacctgcattttgatgacggggaagttcaagcagaaataaaa
aaggtaaaggagcactaa
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