Limosilactobacillus reuteri subsp. reuteri DSM 20016: Lreu_1438
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Entry
Lreu_1438 CDS
T00535
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lre
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Brite
KEGG Orthology (KO) [BR:
lre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lre03009
]
Lreu_1438
Enzymes [BR:
lre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Lreu_1438
Ribosome biogenesis [BR:
lre03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Lreu_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
Methyltransf_25
PrmA
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_12
N6_N4_Mtase
RrnaAD
Ubie_methyltran
Methyltransf_32
Methyltransf_23
UPF0020
Methyltransf_4
TPMT
Methyltrans_SAM
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
ABQ83684
UniProt:
A5VLG0
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All DBs
Position
complement(1496226..1497605)
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AA seq
459 aa
AA seq
DB search
MKLNIPVHKNEEYPAKVVDLSYEGNGVVKIDDFPVFVPNALPGEEITVKITKVTSHFAWG
RVMDWQTKSPDRVDVKDKKYIQTGIAPLGHLKYDAQLKFKQHQIQELLAKAHLDEIEVLP
TMGMEKPYHYRNKAQVPVKMVHGQLETGFYKRGSHNLVPIEDFYIQDPEIDKAIVVVRDL
LRQYHITPYDEQTGKGVIRTVMVRRGYYSHEMMVVLVTNTKRLPMEKQIVDGIVAGVPEV
KSIVQNINDKRTNRLLGNKNKTLWGADEIHDQLLGIDFAISPLSFYQVNPQQTERLYQTA
IDNAGLDGNQTVIDAYCGIGTISLAVAKHAKQVYGVEIVPAAIEDAKHNAKRNGIKNAKF
VVGKAEEQFAKWQAEGLKPDVVIVDPPRKGLAESLIEATGKMGPKKVIYVSCNPATLVRD
IKRFADQGYHVTKPIQPVDQFPQTTHVESVTVLERAQND
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactaaacattccagtacataaaaatgaagaatatcccgcaaaagtagtggattta
tcttacgaaggcaatggggtcgttaagattgatgattttcccgtctttgttcctaatgcc
cttcctggtgaagagattacggtaaagatcaccaaagtaaccagccactttgcatgggga
cgagtaatggactggcagacgaagagtccagaccgcgttgatgttaaggataaaaagtac
attcaaacgggaatcgctccacttggtcatttgaaatacgatgctcaactgaaatttaag
caacatcaaattcaagaattattggctaaagcccacttagatgagattgaagttttgcca
acgatggggatggaaaagccttatcattaccgcaacaaggcccaagtaccagtaaaaatg
gtccacggtcaattagaaaccggtttttataagcgggggagccacaatttagtacccatt
gaagatttctatatccaggatccagaaattgataaggccattgtggttgtccgtgactta
ttacgacaataccacattacgccatatgatgaacaaactggtaagggcgtgattcgcaca
gtaatggttcggcggggatactacagccatgaaatgatggtagtcttagtcacgaatacg
aagcggctgccaatggaaaagcaaatcgtcgacggaatcgttgccggagtgccagaagta
aaaagtattgtgcaaaatatcaatgataagcgaacgaaccgcttgctcggcaataagaat
aaaacgttatggggtgctgatgaaattcatgatcagctcctcgggattgattttgcaatt
tcaccattatccttctaccaggttaatccgcaacagactgaacgcctttaccaaacagcc
atcgacaatgcaggcttggacggtaatcaaaccgtcattgatgcctattgtggaattggc
acgatttccctggcagtagctaagcacgctaagcaagtttacggggtcgaaattgttcca
gcggcgattgaagatgccaaacataatgctaaacggaatggtattaagaacgccaaattt
gttgttggtaaggcggaagaacaatttgctaagtggcaagcagaagggctcaaaccagat
gttgtcatcgttgatccaccacggaagggcttggctgaatcattgattgaagctactggt
aagatgggaccgaagaaagtgatttatgtttcctgcaacccagctactttagttcgtgat
atcaagcggttcgctgaccaaggctaccatgtaacaaagccaattcagccagtagaccag
ttcccacagacgacgcatgttgagtcagtaacggtgctggaacgagcacaaaacgattaa
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