Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_0315
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Entry
LAR_0315 CDS
T00735
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf03030
DNA replication
lrf03430
Mismatch repair
lrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAR_0315
03430 Mismatch repair
LAR_0315
03440 Homologous recombination
LAR_0315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrf03032
]
LAR_0315
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_0315
Enzymes [BR:
lrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAR_0315
DNA replication proteins [BR:
lrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAR_0315
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAR_0315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
AAA_22
TIP49
AAA_19
AAA_assoc_2
AAA_24
ZapB
AAA_14
AAA_7
DivIC
AAA_16
VPS51_Exo84_N
LETM1_RBD
AAA_2
CCDC92
ACR_tran
DUF4466
Mg_chelatase
RNA_helicase
AAA_18
DUF6779
DUF3573
FapA
CENPH
DUF5660
Prefoldin
Motif
Other DBs
NCBI-ProteinID:
BAG24831
LinkDB
All DBs
Position
372860..374695
Genome browser
AA seq
611 aa
AA seq
DB search
MSYQALYRVWRPQRFDDLVGQQIVTRTLKNAIITHQISHAYLFAGPRGTGKTSAAKIFAK
AVNCHHSKDGEPCNECEICKAITNGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRVQRFDFRRISA
EDAFNRMKYILDQKKVTYDEKALWVIANAAEGGMRDALSILDQVLSFSDNEVKLDDALLV
TGSVTKQLLKKYFLEISKHEGATALDTMKDILDEGKDGQRFIEDLISFIRDILLYQESPS
LISVESTGLKQEDFEEIVQLASSATLYRMIDELNNIQEEMRFTTHPDVYLEVLTIKLAQI
EPQKNLQSAPAVSADTNAEATKTIEKLQQEIQQLQQTVKQLQNTPVRASRPSPRQQNEQP
RVQQKKVQVNLNKIYPVLENATRQDLINVRELWGDMLNLLSVPQRSLLHVSQPVAASAAG
IIVAFDYPFLFQQAADDTTLLENMESALQRLTGNERQVVFVPKDKWPKIRQDFIKDHGFG
KNQQKSQPITQKPQTTEESGQTPAATPAPMEEPPLPPEDEALTEEKSPQEDKQVATAQKL
FGSDIVKVEDN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggcattatatcgtgtctggcgaccacagcgattcgatgatcttgtcggt
caacagattgttacaagaaccctaaaaaacgccattatcactcaccagataagccatgca
tacttgttcgctggtccacgtggtactggtaaaacctcagcagcgaagatttttgctaaa
gcggttaattgtcatcactctaaggatggcgaaccatgtaatgagtgtgagatttgtaaa
gcaattacgaacgggcaattaaatgatgtaattgaaatcgatgcggcttctaataatggg
gttgaagagattcgtgatattcgggataaggcaaaatatgcccctacccaagcggattac
aaggtctatataattgatgaagttcacatgctttcaacaggggcctttaatgcattgcta
aaaacgcttgaagaaccaccagccaatgtgatttttattctcgcaactacggaaccccat
aaaattcctttaacaattatttcgcgagttcaacgatttgattttcgacgaatttcagca
gaagatgcatttaatcgaatgaaatatatccttgatcaaaagaaagttacttatgatgaa
aaagcattatgggtaattgcgaatgccgctgaaggaggaatgcgggatgcgttgagtatt
cttgaccaggtgctttctttcagtgataatgaagtaaagttggatgatgctttattagtt
acaggaagtgttactaaacagttattaaagaagtactttttggaaattagtaagcatgaa
ggggcgactgctcttgatactatgaaggatattttagatgaagggaaagacggtcagcgg
ttcattgaggacttgatttcctttattcgtgatattctgttgtaccaagaatcaccaagc
ttgattagtgttgaaagtacaggtctaaagcaggaagactttgaagaaatagtccaactt
gcttcttcagcgaccttataccgaatgatcgatgaactaaataatattcaagaagagatg
cgttttacgacccatccagatgtgtatttggaagttcttacaataaaacttgcacaaatc
gaaccacaaaagaatcttcaatcggcaccagcagtttctgcggatacaaatgctgaagct
actaagacgattgaaaaattacaacaagagattcagcaattgcaacaaacagtaaaacag
ttgcagaatacgccggtaagagctagtcgaccatcacctcgccaacaaaatgagcagcca
cgagtacaacaaaagaaagtgcaggttaatctcaataagatttacccagtgttagaaaat
gcgactcgtcaagatttaataaatgttcgtgagctatggggagatatgttgaacctattg
tcggtgccgcaacggtcattacttcacgtttcacaaccggttgccgctagtgccgcggga
ataattgttgcttttgattatccgttcttattccaacaagcagctgatgatacaacgttg
ttagagaatatggaaagtgctttgcaacgtttaactgggaatgaacggcaagttgttttt
gtacctaaggataagtggccaaaaattcggcaagactttatcaaggatcatggttttggt
aagaatcagcaaaagtcgcaacctattacacaaaagccgcaaactactgaagaaagcgga
caaactcctgcagctacaccagcaccgatggaggaaccaccgctacccccagaagatgag
gcactaactgaagaaaagtcacctcaagaagataaacaagtagcaacagcacagaagcta
tttggtagtgatattgttaaagtagaagataattaa
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