Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_0372
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Entry
LAR_0372 CDS
T00735
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAR_0372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_0372
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAR_0372
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAR_0372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
T2SSE
AAA_5
AAA_19
AAA_7
AAA_25
AAA_30
AAA_22
AAA
DUF8810
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BAG24888
LinkDB
All DBs
Position
431846..433861
Genome browser
AA seq
671 aa
AA seq
DB search
MIYRQPDKKFELVSEYKPTGDQPQAINQLTKGIEDGEKAQILLGATGTGKTFTISNVIAN
VNKPTLILSHNKTLAGQLYGEMKKFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASI
NDEIDKLRHSATTSLLERNDVIVVASVSSIFGLGDPREYQNSVLSLRVGQEIERDRLLTE
LVNIQFDRNDIDFQRGRFRVRGDVVEIFPASRDERALRVEFFGDEIDRIREVDALTGEVI
GDRDHVSIFPATHFMTNEEVMDRALPQIEADMKKQVKKFTDEGKLLEAERIQQRTTYDIE
MMREMGYTNGIENYSRYMDGRKPGEPPYTLLDFFPKDFLLVVDESHQTMPQVRGMYNGDR
ARKQMLIDYGFRLPSALDNRPLKLPEFEQHVNQVVYMSATPGPYEMEQTDHVAQQIIRPT
GLLDPTVEVRPVMGQIDDLVGEINKRIEKNERVFVTTLTKKMSEDLTDYLKDMGLKVKYL
HSDIKTLERTQIIRDLRLGKFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNENGAVIMYADTVTDSMQKAMDETKRRRTIQMKYNEEHHITPHTIIKPIQEA
ITVTKKATDETEADNSAEFTDKDFAKLDKEAQAKMLDELTEQMRSAAKRLDFEQAATLRD
TIMELKTKAKK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgatttaccggcaaccagataaaaaatttgaactagtgtcagagtacaagccaaccggc
gaccagccccaagcaattaatcaattgacaaaggggattgaagatggtgaaaaagctcaa
atcttattaggggcaacgggaactggaaaaacatttacgatctcaaatgtgattgctaat
gtcaataagccaactttgattctttcccataataagaccttagctgggcaactctatggt
gaaatgaaaaaattcttccctcataacgcggttgaatattttgtttcctactatgactac
tatcaaccggaagcatatgttccatcaagcgatacttatattgaaaaagatgcgtcaatt
aatgatgagattgataagctgcggcactctgccaccacttccttgttggaacgaaatgat
gtaattgtcgttgcctctgtttctagtatttttggattaggggatcctcgcgaataccaa
aatagcgtcctttctttgcgtgttggtcaagagattgaacgtgatcgattgttgaccgaa
ctggttaatattcaattcgatcgcaatgatattgattttcaacggggacgtttccgcgtt
cgtggtgatgtagttgaaatctttccggcgtcgcgtgatgaacgggcattgcgggttgaa
ttcttcggggatgaaattgaccggattcgtgaagttgatgcgctgacaggcgaagtgatt
ggtgaccgggaccatgtttctatcttcccggcgactcactttatgactaatgaagaagtc
atggatcgggcattgccacaaattgaagctgatatgaagaaacaggtaaagaagtttact
gatgagggaaaacttcttgaagcagagcggattcagcaacggacaacttatgatattgaa
atgatgcgtgagatgggctacaccaatggaatcgagaattattcgcgttacatggatggt
cgaaagcccggcgaacctccctatactttattagatttcttccctaaagatttcttatta
gttgttgatgagtcccaccaaactatgccgcaagtacggggaatgtataatggggaccgg
gcgcggaaacaaatgttaattgattatgggttccgcttaccgagtgcgcttgataatcga
ccattaaaactaccagaatttgaacaacatgttaatcaagttgtatatatgtctgcaact
cctggcccatatgaaatggaacagacagaccacgttgctcagcaaattattcgaccgact
gggttgcttgacccaacagtcgaagttcgcccagtaatgggacagattgatgacctagtt
ggtgaaattaacaaacggattgagaaaaatgaacgtgtttttgttacgaccttgacgaaa
aagatgtccgaagaccttacggattatctaaaggatatggggttaaaggtcaaatacctt
catagtgatattaagactcttgaacggacgcaaatcattcgtgatctccgtcttggcaaa
tttgatgttcttgttgggattaacctcttgcgggaaggcctagatgttccagaagtatcc
ttggtcgccattcttgatgccgataaggaaggctttttacgtaatgaacgttcccttatt
cagacgattggtcgcgcggcccggaatgagaatggggcagtaattatgtatgctgatacc
gtgactgactcgatgcaaaaggcaatggatgaaacaaagcggcgacggacgattcagatg
aaatacaatgaagaacatcacattacgccgcatacaatcatcaagccaattcaagaagca
attactgttactaagaaagcgacggatgaaactgaagcagataacagcgctgaatttact
gacaaagattttgcaaagttggataaagaggcccaagcaaagatgcttgatgaattaaca
gagcaaatgcgctctgctgctaaacgccttgactttgaacaggctgctacgcttcgtgat
acgataatggaattaaagacaaaagcaaaaaaatag
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