Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_0397
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Entry
LAR_0397 CDS
T00735
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf03030
DNA replication
lrf03430
Mismatch repair
lrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAR_0397
03430 Mismatch repair
LAR_0397
03440 Homologous recombination
LAR_0397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrf03032
]
LAR_0397
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_0397
Enzymes [BR:
lrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAR_0397
DNA replication proteins [BR:
lrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAR_0397
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAR_0397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BAG24913
LinkDB
All DBs
Position
complement(462831..463370)
Genome browser
AA seq
179 aa
AA seq
DB search
MMNFIAMDFETANGKRYSACSLALTIVRNGQIADEFYTLINPHTKFFWRNTQIHGIHERD
VQNAPDFPEVWEHINQFYTPDKLVIAHNNRFDNSVLRNTLEHYNIEVPAYQTLDTVASSR
QLIPGLTNYKLNTVCDALNIDLHHHHNALDDAQACANILLYQSKHFTPQQIQPFINLIG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattttatagcaatggactttgagactgctaatggcaagcgttacagtgcatgt
tcacttgcactcacaatcgttcggaatggacaaattgccgacgaattttacaccctaatt
aatcctcatactaaattcttttggcgtaatactcagatccacggtattcatgagcgtgac
gtccaaaatgcgcctgattttccagaagtatgggaacatatcaaccaattctacactcct
gataaactggttattgcccataataatcggtttgataatagcgttttaagaaatacgtta
gagcattacaatatcgaagtccccgcctaccagacactcgatactgttgcttcaagccgc
cagttgattccaggactaacaaattataaacttaatactgtttgcgacgcgttaaatatt
gaccttcatcaccaccataatgctcttgatgatgcccaggcttgcgctaacattctgctt
tatcaaagtaagcattttaccccgcaacaaattcagccctttattaatttaatcggctaa
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