Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_0899
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Entry
LAR_0899 CDS
T00735
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAR_0899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_0899
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAR_0899
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAR_0899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
DnaJ_CXXCXGXG
AAA_21
AAA_29
AAA_15
nSTAND3
RsgA_GTPase
DUF5679
cobW
DUF463
DUF4350
NRDD
Motif
Other DBs
NCBI-ProteinID:
BAG25415
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Position
1020857..1023370
Genome browser
AA seq
837 aa
AA seq
DB search
MTETILPTQIEVKGGRVHNLKNIDINIPLHKFVAISGLSGSGKSSLAMGILYEEGSRRYL
EALSTYTRRRIKLGAQADVTSVKHIPSALALKQRPAIPSERATVGTMSEMLNVIRLIFSR
LGEPVCPNGHRLKPSLEIAEVMSKSGDEMGQLTCPSCGTKFYAYGAEDFAFNSDGACLRC
HGTGKVRELDESKLIGDENLSLADGAVASWHLPGRNFMPSVAEQAGVRIHVPYKDLTPKE
KDFVLNGPQKKFKMDFRSGTGRVFHDFNALYENAHEAVLASAKSSKSERAQKRISEFFHY
STCPVCHGTRLKPELLKQLAGGLNIAQVSDLTLGELSKWKHDVLAALPSDMKKMATSLFK
EFDDNLRPLLELGLDYLTLSRNGNTLSTGELQRIQLARTLRTQTTGVLYILDEPSIGLHP
DNITGLLNVFKELVAQGNSLVVVDHNVDIIKEADWIIEIGPGSGEKGGEILTEGTPSQIA
DNPRSKIGPYLNWTAVLKSRPIANEPASQEITFEVKDYYNLKDVQGEIPVNRLTAITGFS
GAGKTSLILDSLVPAIHAQASGTKLPSQVSKLLSPLKEVVSVDAAPIGKTNRSTVATYTS
IMDNLRKLFAAQPLAKEEHYTPSYFSYNNKQGACPTCGGAGVVTLDIQFLPDMQQTCPTC
GGSRYNKEVQKVKWQGYSIVDLLKLDVRAAMSVFKEVPKVARELQLLDEVGLGYLHLGES
TPSLSGGEAQRLKLVKHLNHNQSETLFVFDEPTIGLHPLDVKTLLAVMQQLLDRGATIIT
ITHDLNLIINADYMLDMGPRGGSSGGKIVAQGNPLALIQKPESLTSKYLAEYWSRFN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaaccatactaccaacacaaattgaagtaaaaggtggaagagtccacaacctt
aagaacattgatatcaatatcccgctacataaatttgtcgcaatttcgggattatctggt
tctgggaaaagctcattagcaatgggaattttatatgaagagggatctcgtcggtactta
gaagcgctttctacttacacacgacggcggataaagttaggcgctcaagccgatgttaca
agtgttaaacatattccttcagcactagcattgaagcaacgtcccgcaattccgtctgaa
cgagcaactgttggaacaatgagtgagatgttgaatgtaattaggctgatcttttcgcgg
cttggcgaaccggtctgtccaaatgggcatcgtttaaaaccaagtcttgaaattgcagag
gtaatgagtaagagcggcgatgagatgggacaattaacctgtcctagttgcggcacaaag
ttttatgcctatggagcagaagactttgcattcaattctgacggagcctgcttacgatgt
catggaacaggaaaagttcgtgaactggatgaaagtaaacttattggggatgaaaatctt
agtttagctgatggggcagttgcttcatggcatttgcccggacgaaactttatgccgagt
gttgctgaacaggcaggtgttcggatccatgttccatataaagatttaacccctaaagaa
aaagattttgttttaaatggtccccaaaagaagtttaagatggacttccgctctggaaca
ggccgcgtttttcatgactttaatgctttatacgagaatgctcatgaagcggtattagca
tctgccaaaagcagtaagagcgagcgggcacaaaaacgaattagcgaatttttccattat
tcaacgtgcccagtttgccatgggacacgattaaagccagaattattaaaacaattagct
ggtggtttaaatattgcacaagttagtgaccttacgcttggagagttgagcaagtggaag
catgatgtattagctgctcttccttcagatatgaaaaagatggcgacctcattgtttaag
gaatttgatgataatttacgaccattactggaattaggccttgattatttaactttatcg
cgaaatgggaatacgttatcgacaggtgaactacaacgtattcagcttgcaagaactctt
cgaacccaaacaactggtgtcttatatattctagatgaaccttccatcggcttacatcct
gacaatattacgggtctcttaaatgtatttaaagaattagtggcccaaggtaattcatta
gtagttgttgatcacaatgttgatattatcaaagaagcagattggattattgaaatcggc
ccgggttctggagaaaaaggtggagaaattcttacggagggaacaccatcgcaaatcgct
gacaaccctcggtctaagattggtccttatttaaattggacagcagtattaaaaagtcgc
cccatagcaaacgaaccagctagtcaggagatcacctttgaagtaaaagattattacaac
cttaaagacgtccagggagagattccagttaatcggctgactgctatcactggtttttcg
ggtgctggtaaaactagtctaatccttgatagtttagttcccgctattcatgctcaagca
agtgggactaaattaccttcacaagttagcaaattattaagtccgttaaaggaagtagtg
agtgttgatgcagcgccaatcggtaaaactaaccggtcaacagtcgcaacttataccagt
attatggataatctgcggaagttatttgcagcccagcccttagccaaagaggaacactat
acaccttcttacttttcttataataataagcagggagcatgtccaacgtgtgggggcgcg
ggggtcgtaactcttgatattcaattcttgccagatatgcaacagacttgtccaacatgt
gggggaagtcgatacaataaagaagttcaaaaagttaagtggcagggatattcaattgtt
gatctcttaaaattagatgttcgggcagcgatgagtgtatttaaggaagtgccgaaagtt
gctcgtgaacttcaattattagatgaggtgggcttagggtacctgcacttaggcgaaagt
acgcctagtctttctggtggtgaggcgcaacgcttaaaacttgttaaacaccttaatcat
aatcaaagcgaaacgttatttgtatttgatgaaccgacaattggcttgcatccccttgat
gttaaaacccttttagcagtaatgcagcaattacttgatcggggagcgacaattattact
attactcatgacctaaatttgattattaacgcagattatatgcttgatatgggtccgcgt
ggtggcagtagtggtggaaaaattgtggctcagggaaatccgttagcccttattcaaaaa
ccagaaagtttaaccagcaagtatttggcagaatattggtcaagatttaattaa
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