Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_0985
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Entry
LAR_0985 CDS
T00735
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_0985
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAR_0985
Archaeal homologous recombinant proteins
LAR_0985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
UDPGT
AAA_21
GTP_EFTU
FERM_C_FAK1
Motif
Other DBs
NCBI-ProteinID:
BAG25501
LinkDB
All DBs
Position
complement(1128058..1131159)
Genome browser
AA seq
1033 aa
AA seq
DB search
MRPLTIELHYFGPYEHQVIDFTQFTERSLFLVAGNTGAGKTTIFDAMCYALFGQTTNDRD
RSAAALRSDFAPADQETMVKFTFEHQDLKYQIMRRPKQVLKGRRDNLVEHNQAVDLIYPL
ESDHPQKITKIKEADTFITDLLNLTRDQFKQIVLLPQGKFRQFLDSDSNTKEALLRDLFN
TSRYEQWATQLKNDLREQKKSLTTQETKLQSLKETVTAIDAQLTTKEWLAEAKNYLSRLK
ANLEHLGDDEQQQQKKVDQLDAQLHTEQELKKNIEELAELIKVGKTLQAQAGEIQETKQQ
VKVLEWYQEHQTEYQRWKDGEKRLQKLTLDNKFLHEDLRNLQKQQQTIETDLQQTSKQQE
EIDQLQTEVADLTNKLPFFDDRDKLKSAVDELQTNLKQQEKQQAASQKKLQDAQQQLTVV
TNNLKEHENLGEVQVYIAKQEGLQEKLTTAGKDLKQLETKLLSEKKNCAKLEQKQGDAEK
LVQKSQGELDDLNDRFARHQIAILAQKLKPATPCPICGSLDHPHPASLADDGELVTEAQV
KAATVKAQQNRSRLDQLKEQVRQSVAQIANLTTQVETRQANLAELLGDNELPSDWEGQIE
SHAQKLAEMKTDLDRIEQQVKEWRQEEEELQQESKFSQEELDKIDESVNRCKQDLIAKQT
ILKEKAASLPAKFPTKEAADKRIQTDQLKIKAFNNQLESLQQQRQENAKKLAGTNSRIDQ
TKEELATQTTQQDNLHRYLVNLLAQYDVQLKWNFWQEASEQVATLSSLREQVTTFENQVQ
DNQSQQERLTKAINSHPMPDITSTQTKLNAEREQLRQYQQEIGQLTAQYKQLEETDQKII
KAVEKTGKLDQEINELQTLTDVVTGNTENHVSLERYVLQAYFQDVLVAANIQLDRLTNSR
YQFELATESHGAGAKWSGLEVNVYDDNAGRTRSARTLSGGESFMASLALALALCQIVQEQ
SGGIKIDALFIDEGFGSLDQQALEDALHSLQELEGHRMIGIISHITELEEQIPDQLIVRS
RNGRSYVAYQHEI
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccattaacgattgaactacattactttggaccgtatgagcatcaagtgattgac
tttacgcagttcacagagcgttccttatttctggtagcagggaatactggtgcagggaaa
accacgatttttgatgcaatgtgttatgcgctttttggtcaaacaaccaatgatcgtgat
cggtcggctgctgctttgcgttctgatttcgcaccagctgatcaagaaacaatggtgaag
tttacctttgaacaccaagaccttaaatatcaaattatgcgtcgtcctaaacaggtttta
aagggacgccgcgacaatttggttgaacataatcaagccgttgatcttatttacccgctt
gaaagcgatcatccccagaaaatcactaaaatcaaggaggcagacacgtttattactgac
ttgctcaatctgacccgtgatcaatttaagcagattgtccttctccctcaaggaaagttt
cggcagtttcttgattcagatagcaatactaaggaagcccttctacgtgacctctttaat
acgtcccgttatgagcagtgggcaacgcagctaaaaaatgatttgcgtgaacagaagaag
tcattgacgactcaagaaacaaaacttcaatcattaaaggaaacagtaaccgcgattgat
gcgcaattaacaactaaagaatggttagcggaagcaaaaaattacttatcccgactaaaa
gctaatcttgaacacttgggcgatgatgagcagcaacagcaaaagaaagttgatcagctt
gatgcccaacttcatactgagcaagagttgaagaagaatattgaggagttagctgaactt
atcaaggttggaaaaacactgcaagctcaagcgggagagatccaagaaacaaagcagcaa
gtaaaagtccttgaatggtaccaagaacaccagacagaatatcaacggtggaaagatggc
gaaaaacgtctccaaaaattaacgttagacaataaatttctccatgaggacctgcgcaac
cttcaaaagcaacagcaaacaattgaaaccgacctacaacaaacgagtaagcagcaagaa
gaaattgatcagcttcaaactgaggtcgccgacttgacgaataaactcccattcttcgat
gatcgagataagctaaaatcagctgtcgatgaactacaaacaaacttaaagcagcaggaa
aaacagcaagctgcttcccagaagaagttgcaagacgctcaacagcaattgacggttgtt
actaataatttaaaagagcatgaaaacttgggtgaggttcaagtttacatagcaaaacaa
gaaggccttcaggaaaaattaacgactgctggaaaagatttaaagcaattagaaacaaaa
cttttatctgaaaagaaaaattgcgcgaaattagagcaaaagcagggggatgctgaaaaa
ctcgttcaaaaatcgcaaggtgagttggatgacttaaatgatcgctttgcccgtcaccaa
attgccattcttgctcaaaaattaaagccggccaccccttgcccaatttgtggatcactt
gaccacccccatccggcaagcttagcagatgatggtgaattggtaacggaagcgcaagtt
aaagcggcaaccgttaaagctcaacaaaaccgtagtaggcttgaccagttaaaagagcaa
gttcgccaaagcgttgcccaaattgcgaacttaacaacacaggtagaaactcggcaggcg
aatttagctgaactgttaggggataatgaattaccgagtgattgggagggacaaatcgaa
agtcacgctcaaaaactagcagaaatgaagactgacctcgatagaatagaacaacaggtt
aaagaatggcgccaagaagaggaagaattgcaacaagaatccaagttctctcaagaagaa
ttagataaaatagacgaaagtgtgaaccgctgcaaacaggatttaatcgccaagcagact
attctgaaagaaaaagcagcttctttaccagcaaaatttcctactaaagaagctgctgac
aagcgaattcaaactgatcaactaaagatcaaagcctttaataaccagcttgagtcattg
caacaacaacgacaagaaaatgccaaaaaattagcagggacaaatagtcggatcgaccag
actaaagaagaacttgccacccaaacgacgcaacaggataacttacaccgatatcttgtg
aatcttttagcccaatatgatgtccaacttaaatggaatttctggcaagaagctagtgaa
caagtggcaacattgtcatctttacgtgaacaggtaacgacctttgagaatcaagtccag
gataatcagtcccaacaagagcggttgactaaggccatcaatagtcatcccatgccagat
attacatcaacgcagacaaaacttaatgctgagcgtgaacaacttcggcaatatcagcaa
gaaattggtcagttaactgctcagtataagcaattagaagaaacggatcaaaagattatt
aaggcagtcgaaaaaactggaaaacttgatcaagaaattaatgaattacaaacattaaca
gatgttgtgactgggaataccgaaaatcacgttagcctagaacggtatgtattacaggca
tattttcaagatgtcttagtagcagccaatattcagttagaccggttaactaatagtcgc
taccagtttgaattagcaacggaaagtcatggggccggtgccaagtggagtgggcttgaa
gttaatgtatatgatgataatgctggcagaacgcgaagtgcccggacgctttctggtggt
gaaagttttatggcttcgcttgctcttgctttagctctctgccagattgtccaagagcaa
agtgggggaattaagattgatgcgctctttatcgatgaaggatttggttcccttgatcag
caagctcttgaagatgctcttcattcccttcaagaacttgaaggccaccggatgattgga
attatcagtcatatcactgaacttgaggagcaaattccagatcagttaattgttcgatca
agaaatggccgtagttatgtcgcataccagcatgaaatataa
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