Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_1108
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Entry
LAR_1108 CDS
T00735
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAR_1108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrf03021
]
LAR_1108
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_1108
Enzymes [BR:
lrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LAR_1108
Transcription machinery [BR:
lrf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAR_1108
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAR_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Dbr1_C
Motif
Other DBs
NCBI-ProteinID:
BAG25624
UniProt:
B2G842
LinkDB
All DBs
Position
complement(1270018..1270236)
Genome browser
AA seq
72 aa
AA seq
DB search
MILFPSVDELLKHIDSRYSLVMLASKRANELDAGAAPLLEHYDSSKSVGKALEEILAGKV
TIDPDHTEDLQD
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgatcctttttccatcagttgatgaattattaaaacatattgattctcgttattcatta
gttatgcttgctagtaagcgtgccaatgaattagatgcaggagctgccccattacttgaa
cattatgattcaagcaaatcagttgggaaggcccttgaagagattttggctggaaaagtt
acgatcgatcctgatcatactgaagacttacaggattaa
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