Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_1517
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Entry
LAR_1517 CDS
T00735
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf03420
Nucleotide excision repair
lrf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAR_1517
03430 Mismatch repair
LAR_1517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_1517
Enzymes [BR:
lrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAR_1517
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAR_1517
MMR (mismatch excision repair)
Other MMR factors
LAR_1517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
PhoH
AAA_30
SLFN-g3_helicase
Catalase_C
DEAD
AAA_16
NACHT
YflT
AAA_12
XhlA
NPHP3_N
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BAG26033
LinkDB
All DBs
Position
complement(1721949..1724255)
Genome browser
AA seq
768 aa
AA seq
DB search
MSTKTEKELEQKYLDNVIDKVKQAEQKAEEKIKTAQHDIKGINKQIDDIHLNTTTYSGMM
DTAMSFRAQQQMLDERQNSWQHAADRLATLQRLEKKPYFARIDFREKGANESEKVYIGLA
SFTDKPDHFLVYDWRAPISSVYYEGKLGKVKYQTPVGEQEVDLTLKRQFQIKDGVIVTIF
DTDEQVGDQMLLDALGNHSSTKMKSIVTTIQRKQNEIIRDTKNELLFVQGAAGSGKTAAV
LQRVAWLLYRYRGNLTSSQVVLFSPNQLFNDYIDQVLPELGEHNMVQMTYFQFANRRVPK
LHVQNLEQRFESHQDETAKNAQQLLTSLQYFKATERYANHLGHANMRFRNLMFNGKVFLS
KDKIKEIYYSFNNNYNLGNRLDGTKEALIKYLNHRVGSEMRNKWVEDEIQSLSKEEIDNL
FNNQPREFEDEDKEYKFLARQIVMRAFMPIKKAIDHNQWLNINGQFLHLLRVTPKLVNIA
EYGISAEQWKGYVDGIKEELKKGNISANGITIYLYLYDLITGKRGQRDIRYVFVDEVQDY
DAYQLAYFKYRFPRAKFTLLGDLNQAIFTHENSRSLLKQLGTMFDPEKTKVVQLTKSYRS
TKQITDFTKHILIDGEAIEAFEREGNKPQVYQTKDEQEGVAAVINILNKYQNDHDAVAII
GKDLKDSEELYQKLNANNIKTTVIRTENQRLVKGPIVVPSYLAKGLEFDAVIVWNANDQQ
YHGNDERQLLYTICSRAMHELSLVSIGRTTSLLNQVPTDEYEKVNVDK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaaaactgaaaaagaactagaacaaaagtaccttgataatgtgattgataaa
gtaaaacaggccgaacaaaaagcagaagaaaagattaaaacggctcaacatgatattaag
ggcatcaataagcaaattgatgatatccacttaaataccactacttattcaggcatgatg
gatacggccatgtcttttcgtgctcaacagcagatgctagatgaacgtcaaaatagctgg
caacacgctgcagaccggctagcaactttacagcgacttgaaaagaaaccttactttgct
cgcattgattttcgtgaaaaaggtgccaatgaatccgaaaaggtatatatcgggcttgca
tcttttaccgataagccagatcactttcttgtttatgactggcgagcaccgatttcgtct
gtttactatgaaggaaagctcgggaaagttaagtaccagactccggtaggtgaacaagag
gttgatcttactcttaagcgccaattccaaattaaagatggcgtgattgtaaccatcttt
gataccgacgaacaagtaggcgaccagatgcttcttgatgctcttggtaaccattcaagt
accaagatgaagagcattgtaacgacgattcaacggaaacaaaatgaaattattcgtgac
actaaaaatgaattgttgtttgttcagggggctgctggctcgggaaagacagctgcagtt
ctccaacgggttgcctggcttctttaccgttaccggggtaatttgacctcttcacaagtt
gttcttttttcacctaaccaattatttaatgactacattgatcaagttttaccggaattg
ggtgagcataatatggtccagatgacttacttccagtttgctaatcgtcgggtaccaaag
cttcatgttcaaaacttagaacaacggtttgaaagtcaccaagatgaaacggctaagaat
gcacaacaactattaactagcttacaatatttcaaagcaacagagcgttatgctaaccat
cttggtcatgctaatatgcgtttccgcaaccttatgtttaatggtaaagtctttttgagc
aaagataagattaaggagatttactactcatttaacaataactataacctgggaaatagg
ttggatggaacgaaagaagctcttattaaataccttaatcaccgtgttggatctgaaatg
cgcaacaaatgggtagaggatgaaattcaaagcttgagtaaagaagaaatcgacaaccta
tttaataaccagccacgtgaatttgaggatgaagataaagaatacaagttccttgcgcgt
caaatcgttatgcgggcatttatgccaataaaaaaagccatcgatcataatcagtggctt
aacatcaatggacaatttttacaccttctccgggtaactccaaaacttgttaatattgct
gaatacggtatttctgcagagcaatggaaaggttatgttgatgggataaaagaagagcta
aagaagggaaatatcagtgcaaacggaattaccatttacctgtacctgtatgatttgatt
actggaaagcgtggtcaacgtgatattcgttacgtttttgttgatgaagttcaagattat
gatgcttaccagttagcttactttaaatatcgttttccccgtgctaaattcacattgtta
ggagaccttaaccaggcgattttcactcatgagaatagtcggtcactattaaagcagtta
gggacgatgtttgatccagaaaagacgaaggttgtccaattaactaagtcttaccgttcc
acgaaacaaattaccgactttactaagcatattttaattgacggtgaagcaattgaggcc
tttgaacgtgaaggtaataagccacaagtttatcaaactaaggatgaacaagaaggggta
gcggcagttattaatattcttaataagtatcagaatgaccatgatgccgtcgcaattatt
ggtaaagatctcaaagacagtgaagagttgtatcaaaagttaaatgccaataatatcaag
accaccgttattcggacagagaatcaacggttagtaaaggggccaattgttgtgccgtca
tatctagcaaaagggttggaatttgatgcggttattgtctggaatgcgaatgatcagcaa
taccatggtaacgatgagcgacaattgttatatacaatttgttctcgagcaatgcatgag
ttaagcttagtatcaattggcaggacaactagtttgctgaatcaagtgccgacagatgaa
tatgaaaaagttaatgttgataaataa
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integrated database retrieval system
