Lacticaseibacillus rhamnosus GG: LRHM_0315
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Entry
LRHM_0315 CDS
T02100
Name
(GenBank) putative DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lrg
Lacticaseibacillus rhamnosus GG
Pathway
lrg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LRHM_0315
09124 Replication and repair
03420 Nucleotide excision repair
LRHM_0315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrg03021
]
LRHM_0315
03036 Chromosome and associated proteins [BR:
lrg03036
]
LRHM_0315
03400 DNA repair and recombination proteins [BR:
lrg03400
]
LRHM_0315
Enzymes [BR:
lrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LRHM_0315
Transcription machinery [BR:
lrg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LRHM_0315
Chromosome and associated proteins [BR:
lrg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LRHM_0315
DNA repair and recombination proteins [BR:
lrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LRHM_0315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD
DEAD_2
ResIII
PDDEXK_1
HBB
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BAI40842
UniProt:
A0A809MT84
LinkDB
All DBs
Position
complement(329437..331821)
Genome browser
AA seq
794 aa
AA seq
DB search
MAHNRIGIREFVELTVRTGDLNPVTSNSNNTAMIGSQIHRKLQAAHRESDYEKEVYLKTT
VTVNDEDYQLEGRADGVWTENKTLTVEEIKTSARSWEECSQNTKDRYWAQARIYGHLLCQ
QRHQDHAVITLVYVQTSTDTVSRFTETKSAAELADDFTDLLDEFTAWLKLRSDIIKQRNA
SIATLKFPFPQYRTGQHEFAAAVYKAIYSRARLFVQAPTGTGKTISTLFPTIKAMGSGLI
QRAFYLTAKQSTRRVAEQAIALMADVGLRAKSITLTAKDTITFADEPDDPSQNPYMLGYY
DRLKPALHDLLEYEDQLTRSVIESYARKHTLDPFEFSLDASLFCDVVICDYNYLFNPLVF
LQRFFSEADDSQFFLVDEAHNLVSRARDMYTASLTNQDFINLKQALAPFKGTALTKVRRT
MTRIVTTMNTLADQLLNGQSLIFQAAPLDDLAQVLTRFTETVHDWLAEPPTPALQPAVEL
VLPVFFLANQYLRIGDFYDDTFKTEIAKEHDTIMIKMLCLDPSHFVDDALKKGRGAVLFS
ATLSPMPYFQKLLGGAEHSLAYTLPSPFTPDNQAIIVDASVHTTYRRRTQDLPQLIASLT
TLVRAKAGHYLFFFPSYAYLKMAHEAFTAANPDLKTCVQENAMNESERQAFLDHFKAGSE
PVIGFAVLGGIFAEGIDLKGTQLIGVAIVSVGLPGINPETDQLRAYFDHDAGQGFAYAYQ
LPGFNNVLQAGGRVIRGAKDVGVILLIDERFITPRYARLFPDHWTHAQVSYNPTQLAQLL
THFWEAHHENPTHA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggctcataaccgtatcgggattcgcgaatttgtcgagttaaccgttcgtaccggtgat
ctaaatccggttaccagtaactcaaataacaccgccatgatcggcagccagattcaccgc
aagcttcaagcagcgcatcgggaatcggattatgaaaaagaagtctatttaaaaaccacc
gttaccgtcaatgacgaggattatcaactggaaggccgtgccgatggggtttggaccgaa
aacaagacgctaaccgttgaagaaattaaaaccagtgcccgttcatgggaagaatgttcg
caaaacacgaaggatcgctactgggcgcaggcacggatttatggccacctactttgccaa
cagcggcatcaagaccatgctgttatcaccttggtttatgttcaaaccagtaccgacaca
gtcagccgcttcactgaaacaaaaagtgccgccgagttagctgatgatttcaccgatcta
cttgacgaattcactgcctggttaaaactgcgcagcgatattattaaacagcgaaatgct
tctatcgccacactcaaatttccgtttccgcagtaccgtactggccaacacgagttcgct
gccgctgtttacaaagccatatacagtcgcgcgcgtttgtttgtgcaggcgcccaccggt
actggcaaaaccatttcaacgcttttcccgaccattaaggctatgggtagtgggttgatt
cagcgcgctttttatctgacagccaagcaaagtacacgtcgggtggcggaacaggcaata
gcgctgatggcagacgtcggacttagggcaaaaagcatcaccttaacagctaaagacacg
attaccttcgccgatgagcccgatgaccctagtcaaaatccctatatgcttggctattat
gatcgcctgaaacccgcactgcatgatcttttggaatatgaagatcaactcacccgatct
gtgattgaatcctatgctcgcaaacacacactggatccatttgaattttcgctagatgcc
agtttgttttgtgatgtggtgatttgtgattacaactatttattcaatcccttggttttt
ttgcagcgattcttcagtgaagccgatgacagtcagtttttcctggttgatgaagcgcat
aatcttgtcagccgggcgcgcgatatgtataccgcaagcctgaccaatcaggactttatc
aacctcaaacaagccctcgccccgttcaaaggaaccgcattaaccaaggtacgccggacg
atgacgcgaattgtcaccacgatgaatacccttgctgatcagctactcaacgggcagtca
ctgatctttcaagcagcaccgctcgatgatctagcgcaggtgttgacccggtttaccgaa
acggttcacgactggctggcagaaccgcccacccccgcgctgcagcctgctgtcgaactt
gttttaccagtgttttttctcgctaatcagtatttacgtattggtgatttttatgacgat
accttcaaaaccgagattgccaaggaacatgacacgattatgattaaaatgctctgtctg
gacccgtcccattttgtcgatgatgccttgaaaaagggccgaggcgcggttttattttcg
gcaaccttatcaccgatgccgtattttcaaaagttactgggaggcgctgaacatagcctt
gcttacaccttgccatcaccgtttacgccggacaatcaggccatcattgtcgatgcgagt
gtccacaccacgtaccgccgccgcacgcaggatttaccgcagctgatcgcaagtctcacc
acgctggtcagggctaaagccgggcattatcttttctttttcccatcttatgcctatctg
aaaatggctcacgaggcgtttactgcggcaaatcccgatcttaaaacctgtgttcaggaa
aatgccatgaatgaaagtgagcggcaagcatttcttgatcactttaaggctggcagtgag
ccggtgattggttttgctgtgcttggcggcatttttgctgaagggattgacctcaaaggg
acgcaattgattggggtggcgattgtgtcagtgggcttaccgggcatcaatccggaaacc
gatcagttgcgagcatattttgatcacgatgctggtcagggctttgcctacgcgtaccag
ctgccaggctttaacaatgtcttgcaggcaggtggccgggtgattcgcggggccaaagat
gtcggcgtaatcctgctcattgatgaacgctttatcaccccgcgttatgcccgtctgttt
cctgatcactggacccacgcccaggttagctacaatcccacgcaattagcacaattactg
acacacttttgggaggcccatcatgaaaacccaactcacgcgtga
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