Lacticaseibacillus rhamnosus GG: LRHM_0648
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Entry
LRHM_0648 CDS
T02100
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lrg
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrg03400
]
LRHM_0648
DNA repair and recombination proteins [BR:
lrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LRHM_0648
Archaeal homologous recombinant proteins
LRHM_0648
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
BAI41175
UniProt:
A0A809MXN1
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Position
679437..680561
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AA seq
374 aa
AA seq
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MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVTVAKQQQVDAIVIAGDLYDRALPSEAAV
ATLDHMLVTLNRKLNYPLLVISGNHDSAVRLRTGRSWFSTTKMYVNTQLAEAFTPVELGD
TQFFLLPYFEPFAVRDYFQDATITNVAQAIRPIVAKMKAQFKPDMRHILVSHFFAAGSDH
SASETKVNVGGLDAVPIDDLAAFDYVALGHLHNHNALHAEPKIQYSGALLKYAVAEAKQE
KGVYIVDTDTMARTFIPLTPQHDLIELKASYAELTDPDFYRQQDRDAYIGVDLTDTQVIP
NVMAQLRKIYPRIISLRRENGVTAVKPLKQRQRDLDPLSLLKNFYAEMMQTDLTADQLKW
AKAGLGEAESGQKQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttctacacacggccgattggcatattggcaaaaaactaaacgattttgactta
ttggaagatcagcaggcggtgtttgaacaattggtgaccgttgccaagcagcaacaagtc
gatgctattgtcattgccggcgatttatatgaccgcgctttacccagtgaggccgcggtg
gcaacgcttgatcatatgctggtaacgctaaatcgtaagctgaattatccattgttggtg
atttccggcaatcacgactcggctgtccgcctacgtactggccggtcatggttttccaca
actaagatgtacgtcaacacgcaattagccgaggcatttaccccagttgaacttggtgac
actcaatttttcttactaccttattttgaaccgtttgctgtccgtgattattttcaggat
gcaacgattaccaatgtagcacaggccattcgcccgattgttgccaaaatgaaagcccag
tttaaacccgatatgcggcatattttggtgagccatttttttgctgccggtagcgatcat
agcgcttcggaaacaaaggttaacgtcggcggattggatgcagtcccgattgatgacttg
gcagcgtttgactatgtggcgttaggtcatttgcataatcataatgcgctgcacgccgaa
cctaagattcagtatagtggtgccttattgaaatatgcggtcgctgaagccaagcaggaa
aagggcgtctacattgtcgatactgacacgatggcgcggacgtttattccgttgacgcca
caacatgacttgattgagttgaaagccagctatgcggaattgactgatccggatttttat
cgccagcaggaccgcgatgcttatattggcgttgatttaaccgacacgcaggtgattccg
aatgtcatggcccagttgcggaagatttacccaaggattatcagcctgcgccgtgaaaat
ggggtcaccgccgtaaaaccgttaaaacaacggcagcgcgatctcgatccgctgagtttg
ttgaagaatttttatgctgagatgatgcaaacagatctgacagcggatcagctgaagtgg
gccaaagcgggacttggtgaagcagaaagcgggcagaaacagtga
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