Lacticaseibacillus rhamnosus GG: LRHM_0741
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Entry
LRHM_0741 CDS
T02100
Name
(GenBank) ATP-dependent DNA and RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lrg
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrg03019
]
LRHM_0741
03009 Ribosome biogenesis [BR:
lrg03009
]
LRHM_0741
Enzymes [BR:
lrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LRHM_0741
Messenger RNA biogenesis [BR:
lrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LRHM_0741
Ribosome biogenesis [BR:
lrg03009
]
Prokaryotic type
rRNA helicases
LRHM_0741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
PRA-PH
Motif
Other DBs
NCBI-ProteinID:
BAI41268
UniProt:
A0A809MY00
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All DBs
Position
773657..775003
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AA seq
448 aa
AA seq
DB search
MDNQFKQYQLKPFVIAGLDAMGITQPTPIQKKVIPALLRGENLVGQSQTGSGKTHAFLVP
LLSLVDPNEDATQVVITAPSRELANQIYAVAQQLTQTEPAIRISRLVGGMDKQKQIDKLQ
AHQPHVAIGTPGRILDMIKRYDLVPASVRHFVVDEADMTLDMGFLETVDAIASSFPEHLQ
MAVFSATIPQKLEPFLRKYMDHPTVIELKPQSVIADTVENILIAVKGRDKNELIYQLVTM
GHPFLVLIFANTKTSVDAIHDYLKHQGLKVAKIHGGIQPRERRRIMKEVADLKYQYVVAT
DLAARGIDIKGVSMVINAEIPRDQEFFIHRVGRTGRNGLPGTAITLYEPGQEDQIAELEH
MGIKFKPKTIQKGELVDTYDRNRRVQRKPKQEDTSLAIRGLVKKAKQKHMPNYRKKIRTA
VLLERKRNAKVARRQALLAEKRKHRKRG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaattcaaacaataccaactcaagccttttgtgattgccggccttgacgcc
atggggattacccagccgacgccgattcaaaaaaaggtgatcccggcgttgctgcgtggc
gagaacctggtaggtcaaagccagactggtagtggtaaaacccatgcctttttggttcca
ttgcttagcctggtagatccaaatgaagacgcgacccaagttgtgattacggcgccatcg
cgggaacttgccaatcagatttacgcagttgcccaacagttgacgcaaaccgaaccggcc
attcgaattagtcgtttagtgggcgggatggacaagcaaaagcagattgacaaattgcag
gcccatcaaccgcacgttgcgattggcacgcctggccgaattctggatatgatcaagcgc
tatgatcttgttccggcatcggttcgtcattttgtcgtggatgaagccgatatgacttta
gacatgggctttttggaaaccgtcgatgccattgcttcaagttttcccgaacatttgcag
atggccgttttttccgcgacgattccgcaaaagctcgaaccgtttttgcgcaaatatatg
gatcatccgaccgtgattgaactcaagccgcaatcggtaattgccgataccgttgagaat
attttaatcgcagttaaggggcgcgacaaaaacgagctgatttatcagttagtgacgatg
ggccatccgtttttggtgttgatttttgctaatacgaaaaccagtgtggatgccattcat
gattatttgaaacatcagggactcaaggttgccaagattcatggcgggatccagcctcga
gaacggcggcgaattatgaaggaagtcgctgaccttaagtatcagtatgtggttgccact
gatttggcggcgcgggggattgatatcaaaggggtatcgatggtgattaatgccgagatt
ccgcgcgatcaggagttcttcattcaccgggtcggacgtactggccgcaatggtttgcca
gggacagcgattacgttatatgagcccggccaggaagatcagattgctgaattggaacat
atgggcatcaaatttaagcctaagaccattcaaaaaggtgagctggttgacacgtacgat
cgtaatcgccgggttcagcgcaagcctaagcaagaggacacgagccttgccattcgcggc
ttggtgaaaaaagcgaaacaaaagcacatgccgaactatcgtaagaagatccggacagca
gtgttattggaacgcaagcgcaatgccaaagttgcacggcgtcaagccttgctagccgag
aaacgcaagcaccgtaaacgagggtga
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