Lacticaseibacillus rhamnosus GG: LRHM_0880
Help
Entry
LRHM_0880 CDS
T02100
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lrg
Lacticaseibacillus rhamnosus GG
Pathway
lrg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRHM_0880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrg03400
]
LRHM_0880
DNA repair and recombination proteins [BR:
lrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRHM_0880
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LRHM_0880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
DUF87
AAA_30
AAA_19
T2SSE
AAA_5
AAA_7
AAA_22
SLFN-g3_helicase
Kinesin
AAA
AAA_25
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BAI41407
UniProt:
A0A7S7JFV3
LinkDB
All DBs
Position
925213..927228
Genome browser
AA seq
671 aa
AA seq
DB search
MIERIADRKFDLVSPYKPAGDQPQAIAKLTKGFEEGKKAQILLGATGTGKTFTMSNIIAN
LNKPTLILSHNKTLAGQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVPSTDTYIEKDSAI
NDEIDKLRHSATSALLERNDVIVVASVSSIFGLGDPHEYKNHVLSLRTGMTIDRNTLLRQ
LVDIQFDRNDIDFQRGRFRVRGDVVEIFPASRDDHAIRVEFFGDEIDRITEVDALTGEVI
GTRDHVAIFPATHFMTSDEQMERAIKSISAELEDRLKVLRGENKLLEAQRLEQRTNYDIE
MMREMGFTSGIENYSRHMDGRKPGEPPYTLLDFFPKDFTIMVDESHVTMPQVKGMYNGDR
ARKQMLINYGFRLPSALDNRPLKIDEFEKHVKRILYVSATPGPYELSRVPKEDIAEQIIR
PTGLLDPKIEVRPVMGQIDDLVGEINKRIDAHERVFITTLTKKMAEDLTDYLKDMGIKVR
YLHSDIKTLERTQIIRDLRLGKFDVLIGINLLREGIDVPEVSLIAILDADKEGFLRAERS
LIQTIGRASRNEHGKVIMYADKVTDSMKAAIDETRRRRAIQEKFNEEHHIQPKTIIKPIR
AAISTYEQSDDEKADAKKTFAEVDYEDMSKADKKELVANLRSQMQAAAKKLDFEQAASLR
DTILELQADMS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacgaattgctgatcgtaaatttgatttggtttcgccttataagccagccggg
gaccagccccaggcgattgctaagctgactaaggggtttgaagaaggtaaaaaggcgcaa
attctgttaggtgcaaccgggaccgggaagacgtttacgatgagcaatatcatcgccaac
ttgaacaaaccgactttgattttatcgcataataaaacgttggctggtcagctgtatggt
gagtttaaggagtttttcccacataacgcggttgagtacttcgtgtcttattacgattat
taccaacctgaagcctatgtgcctagcacggacacttatattgaaaaagacagtgccatt
aatgatgagattgataaattgcggcatagcgctaccagtgcgttgcttgagcgtaatgac
gtgattgtcgttgcttcggtatcttctatctttggtttgggtgatccgcatgaatataag
aaccatgtgttatcgttgcggactgggatgaccattgaccgaaatacgttgttgcggcaa
ttagtagatattcagtttgatcgtaacgatattgattttcaacgcggtcgttttcgggta
cggggagatgtggtggaaattttcccagccagtcgtgatgatcacgccatccgcgttgaa
tttttcggtgatgaaattgatcggattaccgaagtcgatgctttgacgggtgaagtgatt
ggtacgcgagatcatgttgccattttcccggccactcatttcatgacgagcgatgaacag
atggaacgcgcaattaagagtatttctgcagaactcgaggatcgcttaaaagtcttgcgc
ggtgaaaataagcttctagaagcccaacgattagagcagcgtactaattatgatattgaa
atgatgcgcgaaatgggcttcaccagtgggattgaaaattactcgcgccacatggatggt
cggaaacccggagaaccgccgtatacgttgctcgactttttcccgaaagactttacgatt
atggttgatgaaagtcacgttacgatgccacaggttaaaggcatgtataatggcgatcgg
gcccggaaacagatgttgattaattatgggttccgtctgccaagtgccttggacaatcga
cctttgaagattgatgagtttgaaaaacatgtcaaacggattctttatgtgagcgcaacg
ccaggaccttatgaactgagtcgcgttcctaaagaagatattgctgaacagattattcgg
ccgaccgggttgttggatcctaaaatcgaagtgcgtccggtgatgggccagattgatgat
ctggttggcgagatcaacaagcggattgatgcgcatgaacgagtcttcatcacaacgtta
accaagaaaatggcggaagatttaaccgactatcttaaggatatgggaattaaagtccgt
tatttgcatagtgacattaagacgcttgaacgaacccagattattcgtgatttgcggcta
ggtaagtttgatgtattgatcgggattaaccttttgcgtgaagggattgatgtaccggaa
gtatcattaattgcgattctggatgccgataaggaaggcttcttgcgggcagagcgttcg
ctgattcagacgattggccgggcatcgcgtaatgaacatggtaaagtcattatgtacgct
gacaaggtcacggattcgatgaaagccgcgattgatgaaactcggcggcgacgggcaatt
caagagaagtttaacgaagagcatcacatccaacccaagacgattattaaaccgatccgg
gcggctatttcaacctatgagcaatcggatgacgaaaaagccgatgccaagaagactttt
gcagaagttgattacgaagatatgagtaaagcagataagaaagaactggttgccaacctc
cgttcacagatgcaggcggcggccaaaaagttggactttgagcaggcagcttctttgcgc
gatacgattttggaattgcaagcggatatgtcttga
DBGET
integrated database retrieval system
