Lacticaseibacillus rhamnosus GG: LRHM_0973
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Entry
LRHM_0973 CDS
T02100
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lrg
Lacticaseibacillus rhamnosus GG
Pathway
lrg03420
Nucleotide excision repair
lrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRHM_0973
03430 Mismatch repair
LRHM_0973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrg03400
]
LRHM_0973
Enzymes [BR:
lrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRHM_0973
DNA repair and recombination proteins [BR:
lrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRHM_0973
MMR (mismatch excision repair)
Other MMR factors
LRHM_0973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAI41500
UniProt:
A0A7S7FNF9
LinkDB
All DBs
Position
1022701..1024953
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AA seq
750 aa
AA seq
DB search
MVMDAALKGMNDKQAEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKNVNPWNILAI
TFTNKAAREMRERVGKLVDPEIARDIWVSTFHALCVRILRRDIDKLGYNRAFMIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISGAKNELIDPQTYSDEQANSPFTKTVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDPETLGFYQRKFRYIHVDEYQDTNEAQYRLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKKDYPKAQVILLEQNYRSTKTILSAANDVI
KNNLNRQAKTLWTENATGDKITYYRAQSETDEAIFVIRRIEAEMAEHHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPADDMSFNRIVNEPKR
GIGNTSVAKLEAFANQHDWSLLEAAANAELSPISGKARGNLAKFGKMIQRLGQRRKDLNV
TEMMQAILDDSGYLGTLRAANTLEAETRVENLEELLSVTQGFDARYQPENEDSDIFVDFL
AELALLSDQDEVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRAAMDEGELEEE
RRLAYVGITRAKQKLYLTNAYARMLYGQRQNNPASRFIEEIDPELLDISGAAQPKSDIPF
INRTDRAFSSPYSRHPETTGTPVTVKPAPTTGAGKTSWEAGDKVEHRKWGIGTVVKVTGT
GDDQELDIAFKAMGIKRLLAAFAPIKKVEA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggatgccgcattaaagggtatgaatgataagcaggcagaggcggtgttagcc
actgaaggaccggttttgattatggcaggggccggttctggcaagacgcgggttttgacc
caccgaattgcttatttagttgaagaaaaaaacgttaatccatggaacattcttgccatt
acgtttacgaacaaggctgcgcgggaaatgcgggaacgggtaggtaaactggtcgatcct
gagattgcccgcgatatttgggtttcaacgttccacgcattgtgtgttcgtattttgcgg
cgcgacattgacaaactcggttacaatcgggcgtttatgattgctgatccagccgaacaa
ctcactttggttaagcacattttggccgacttcaatctggatcccaaacgttatgatccc
aagtcgattcttggcgcgatttcgggtgccaaaaacgaactaatcgacccgcaaacttat
tcagacgagcaggccaacagcccatttaccaaaactgtggcccaagtttatgcggaatat
caaaaacgcctgcgcagtgatcaagcattggactttgatgatctcatcatgcagaccatt
gtgttatttgaaaaggatcccgaaacgcttggcttttatcagcgtaaattccggtatatt
cacgttgatgagtatcaggatacgaacgaagcccaatatcgcctcgtgcatatgctggcg
gaaggttatcacaatctgtgcgtggtcggggatgccgatcagagtatttacggttggcgt
ggcgctaatatgcaaaacattctggactttaaaaaggactaccctaaagcccaagtcatt
ttgcttgagcagaattatcgctcaaccaagacaatcctgagtgctgccaatgatgtgatt
aaaaacaacttgaatcggcaggctaaaacgctatggacggaaaatgccaccggcgacaaa
atcacttattatcgggctcaaagcgaaaccgatgaagccatttttgtgattcgccgcatt
gaagcggaaatggcagaacatcaccgcaagtacggggattttgcgattttatatcggaca
aacgcccaatcccgtgcgattgaagaagcgttcgtgaagtccaacattccttataaaatg
gtgggcggacataaattctatgatcgtaaggaaattcgcgatgccttggcttatttccgg
ttggtcgtcaatccagctgatgatatgagctttaaccggatcgttaatgaacctaagcgc
gggattggcaatacaagtgttgctaaactggaagcctttgctaatcagcatgattggtca
ctcttggaagcagcggcaaatgctgagcttagtccgatttcaggcaaagcccgcggcaat
ctagccaaattcggtaaaatgattcaacgacttggtcagcggcggaaagatttgaacgtt
acggaaatgatgcaggcaattctggatgatagcggttatttagggacgttacgtgccgcc
aacaccttggaagccgaaacgcgagtggaaaaccttgaagaacttttgtcagtgacccaa
ggatttgatgcgcgctaccagccggaaaatgaagacagtgatatttttgtcgacttttta
gctgaattggcgctgttgtctgatcaagatgaagttgaagaagatgcccaggaagtgacg
ttgatgacgttacatgcggctaaagggctggaatttccagtggtctttctggtgggcatg
gaagaaggacttttcccgttgagtcgcgccgctatggatgaaggcgagcttgaggaagag
cggcggttggcttacgtcgggatcacccgagcaaaacaaaagttatatttgaccaatgcc
tatgcccggatgttgtatggccagcgtcaaaataatccggcgagccgttttattgaagaa
attgatcctgaattgcttgatatttccggtgctgcccagccgaaaagtgatataccgttc
atcaaccgcaccgatcgcgcctttagttcgccttatagccgtcatcctgaaaccactggg
acgccggtaaccgttaaaccggctccaaccactggtgccggcaagacaagctgggaagcc
ggcgataaagtcgaacaccgtaaatggggaatcggtaccgtggtcaaagtaaccggcacc
ggtgacgatcaggaactagatatagcctttaaagcgatgggaattaaacggttattagct
gcgtttgccccgattaaaaaagttgaagcctaa
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