Lacticaseibacillus rhamnosus GG: LRHM_0980
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Entry
LRHM_0980 CDS
T02100
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lrg
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrg03009
]
LRHM_0980
Enzymes [BR:
lrg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LRHM_0980
Ribosome biogenesis [BR:
lrg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LRHM_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
PrmA
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_11
PCMT
DOT1
Methyltransf_32
Methyltransf_4
DUF3325
REGB_T4
Motif
Other DBs
NCBI-ProteinID:
BAI41507
UniProt:
A0A7S7JH08
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All DBs
Position
1032675..1034042
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AA seq
455 aa
AA seq
DB search
MAQPAVTKNQDLEVTIEDLTYEGMGVAKVAGFPLFIEDALPGEKMQVHVLKTQKQYGFAK
VVKRLTDSPDRVAGADSTYIRTGIAPLSILAYPAQLKFKQHQIQELYKKAHLAIKVLPTI
GMKHPLGYRNKAQVPVRLVRGELQTGFYKKHSHDLVPIEDFLIQNPKIDQAIVVVRDLLR
KYRVPPYDERTNRGVIRNIMVRRGRATHQMMIVLVARTWQVPHLNDIVKEITLALPEVTS
VVVNLNDKRTNVILGRKSKTIYGRDYLLDKLLGSEFQISPVSFYQVNPIQTEVLYTKAIE
AAGLTGKETVIDAYSGIGTISLTMARHAKQVYGVEVVESAVHDAEANAARNHIKNVTFEV
GKAEDVMQKWKDADLPVDVLMVDPPRKGLDKTFIDAVGYMKPPKIVYISCNPATLARDLQ
LLAAFGYTAKETQPVDMFPQTQHIESVTLLESMRE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttggcccaaccagctgttaccaagaatcaggatctggaagttacgattgaggatctcact
tatgaaggcatgggcgttgcgaaagtcgcgggttttccgctatttatcgaagatgcgcta
cctggcgaaaagatgcaggtacatgtgcttaagacccagaagcaatacggttttgccaaa
gtggtgaagcgactgaccgactcgcccgatcgcgtggccggcgctgatagtacttacatt
cgcaccgggattgccccgttgtcgattttggcttatccagcacaattaaaattcaaacaa
catcagatccaggaactctataaaaaggcccacttggcgatcaaagtgttgccgacaatc
ggaatgaagcatccactaggttatcgcaataaagcgcaagtgccagtgcggttggttcgt
ggcgaacttcagactggtttttataaaaaacacagccatgacttagtgccgattgaggac
tttctgattcagaatcctaaaatcgatcaggcaatcgttgtggttcgcgacttgttacgt
aaataccgggtgccgccttatgatgaacgtacgaaccgcggcgtgattcgtaatatcatg
gtgcggcgtgggcgggcaacgcaccagatgatgatcgtgttggtggcgcgcacatggcaa
gtaccgcatctgaatgatattgtcaaagaaatcacgttggctcttccggaagtcaccagt
gtggtggttaacctgaatgataaacgtaccaatgtgattctcgggcgtaagtcaaaaaca
atttacggtcgcgactatcttttagacaaactattaggtagtgagtttcagatttcgcca
gtcagtttttatcaggttaatccgattcaaactgaggtgctttatacgaaagccattgaa
gcagcggggttaaccggtaaagaaaccgtgattgatgcgtattctggcattgggacgatt
tccttaaccatggcgcggcacgcaaaacaggtctatggtgtcgaagtcgttgagtcggca
gtgcatgatgccgaggcaaatgcggcgcgtaatcacatcaaaaatgtgacgtttgaggtt
ggtaaagcagaggacgtcatgcagaagtggaaggacgcggatctacctgtcgatgtccta
atggtggatccgccgcgcaaaggcttggataaaacctttattgacgcggtggggtatatg
aagccgccaaagatcgtctacatttcctgtaatcccgctaccctagcgcgtgacttgcag
ttgctggcagcgtttggttatacagccaaagaaactcagccggtggatatgtttccgcag
acgcagcatattgaaagtgtgacattactcgaaagtatgagagaataa
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