Lacticaseibacillus rhamnosus GG: LRHM_1437
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Entry
LRHM_1437 CDS
T02100
Name
(GenBank) ATP-dependent exonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lrg
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrg03400
]
LRHM_1437
Enzymes [BR:
lrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRHM_1437
DNA repair and recombination proteins [BR:
lrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LRHM_1437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BAI41964
UniProt:
A0A809NCV7
LinkDB
All DBs
Position
complement(1502117..1505656)
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AA seq
1179 aa
AA seq
DB search
MGLQFILGDATTDHTQTMAAMIHEKLTADSQNRLFLLVPNHIKFEAEIDLLKRLRQLQQG
NSETYVQSRVQVLSFSRLAWFYLKNTPLYQQPRLDQANNTMLVAKILAERQADLTIYAGE
AQHTGFVTQLADQLSELMIGRITAEDLANTVAALTPGDRHRAKLRDLGIILDQYEAEIGP
YATTASLLSGLQQAMRTHDLTHTFIYLNHFNVFSASESALVETMLETAAEVTIGLVLDRP
YPTTPPVAPNLFLPAGRLYHRLYQKAKTMRVPIRLDQFAQPRHLSLGMRRVASWWQANTN
IEPQPTPPANVADQVRLATATDPYQELRHVAQSIYQAVRNGARYRDFVILARRLDPYATI
IPAIFAEFQIPQFTDLQRPMKDHPLVVLIESLFAIQDHDYQYQDIMRLLHTELLLPQEMT
VADYRDAVDTLDNHLVRTGIAGKKRWTQTEPWRYFQRNPAADETEMDPEADKTAQINAIK
TLVAQTVPALLKQWQAAKTGLEAARSLYHWLTKTGVVDQLNAWREAASAAGELARSRAHE
QAWTTFTALLDDYVTILGNAKFNREQFHELLAAGFASATYTQIPATLDAVVISETGLVRL
AKAKHIFVIGATSTAMPDVPNDDGVLNSEERQLLAAQLPDDRFLPEQGPTTTLGDPFINY
LGFMAASETLTLSYPMQNPQENSENQASPYFQQLKRALHLVPETWAPVTLATTVKSVLGS
PRAMLSDFIRAAGDAQQQKQPLSLAWQSVLSALKQTDLANLAQRLAGSLTYQNDPGRLDP
QLAVQLYGRDMNVSVSRLETYYLNHFEYFLKYGLLLQPRPEFELSPADTGSLFHAVLDRY
LTHLRDQQQNLADVDPAAIMTAVPPMVAEIAKQPGYEILGSTYRMTYLTKRLSRLLIQVL
LNMRQQQQRSGFRPVRTELQFGRIGDTKGLPGLSWPLPHGGRVNVRGKIDRLDIYREPDA
RRFIIVDYKSGQRRFDDSDAYYGIALQMLTYIEAMTNVTAEPPFVPAGALYFHLQDPKLK
YTPELEPALERLKAFKYLGFLVAEHGDELAAVDRTISPESGGRSEIAPLGFKKDGSFNQN
QSNVLTPEALRAYLAHNQALIIDAATQILAGDIALEPFQYGQSSTIVSRSDYQSIMLFDP
ATGFDHYHHVPKLKRKDVIGRLTADPTQIPHSEKEHPQS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggttgcagtttattctcggtgatgcaacgacggatcatacccaaaccatggcggct
atgattcatgaaaagcttaccgctgattcccaaaaccggctttttttactggtaccaaac
catattaaatttgaagcagaaattgatcttctcaaacgcttgcgccaattgcaacagggg
aactcggagacttacgtgcaaagtcgcgttcaggtcttatccttttcccggttggcctgg
ttttatttgaaaaacacgccgctttatcagcaaccgcggctggatcaagctaacaatacg
atgttggttgccaagattcttgcagaacggcaagcggacttaaccatctatgccggagaa
gctcagcatactggttttgtcacacagcttgctgatcaattgagtgaactcatgattggc
cggattaccgctgaagatttagccaataccgttgcggctctgacaccaggcgatcggcac
cgggctaagttgcgtgatttaggcattattcttgatcaatatgaagcagaaatcggtcct
tatgcgacaaccgccagtctgctaagtgggctgcagcaagccatgcgtacccatgatctc
acccacacgtttatctatctcaaccattttaacgtattttctgcttcagagtcagcactg
gtggaaacgatgctggaaaccgccgcagaagtgacgatcggcctcgtgttggatcggcct
tatccaactacaccgcctgttgctcctaatctctttttaccagctggtcgactttatcat
cgtttgtatcaaaaagccaaaacgatgcgcgttcccattaggctagatcagtttgctcag
ccgcggcacttaagcttgggcatgcgacgggtggcgagttggtggcaggctaataccaat
atcgaaccgcagccgacgccacccgcaaatgttgccgatcaggtgcgtttagccactgcg
actgatccctatcaggaattgcggcatgtggcccaatctatctatcaagcggttcgcaac
ggagcacgttatcgggattttgtgattcttgcgcggcgattggatccgtatgcaacgatc
attccggctatttttgctgaatttcagattccccaatttaccgacttgcagcggccgatg
aaggatcatcccttagtagtgttgatcgaaagcctatttgccattcaggatcatgactat
cagtatcaagacatcatgcgcttgttgcatactgagcttttgttgccgcaggagatgacg
gtggcagattatcgcgatgccgtcgataccctcgacaatcatttggttcgaacggggatt
gcaggtaaaaaacgctggacacagacagaaccatggcggtattttcagcgtaatcccgct
gctgatgaaacggaaatggatcctgaagccgataaaaccgctcaaatcaatgccataaaa
acgctggtggctcaaactgtgccggccttactcaaacaatggcaggcagctaaaaccgga
cttgaagctgcgcgaagtttgtaccactggttaacgaaaaccggggtagtggaccagttg
aacgcgtggcgagaagcagcaagtgcagccggtgaacttgctcgcagccgagcgcacgaa
caagcatggaccacatttaccgctttgctggatgattacgttaccattttgggcaacgct
aagtttaatcgcgagcaatttcatgagttgcttgctgccggctttgccagtgcgacttac
acacagattcctgccacacttgacgcggtcgtgatttcagaaaccgggttagtccgatta
gccaaagcaaaacatatttttgtcattggggccaccagcactgccatgccggatgttcct
aatgatgacggcgttttaaacagtgaagagcgccaattattagctgcacagttgccagat
gaccgctttttacccgagcaaggcccaacaacaactttaggtgacccgttcatcaactat
ttgggttttatggccgccagcgagacgttgacgttaagttaccccatgcaaaacccgcaa
gaaaatagtgaaaatcaggcgtcaccttattttcagcaactgaaacgggcgcttcatctc
gtgcccgaaacctgggcgccggtaacactcgcgacaacggtcaaatctgtccttggcagc
ccgcgggcaatgttaagcgacttcattcgggctgccggtgatgcccagcagcaaaaacaa
cccctgagtctggcttggcaaagtgtgttaagcgcattgaaacaaaccgatttagccaac
ctggcccaacgccttgccggaagtttgacgtatcaaaatgatcctggccgccttgatcca
cagctggcggtgcaactctatggccgcgatatgaatgtttccgtgtcgcgattggagacg
tattatcttaatcatttcgaatatttccttaaatatggtttgctgctccaaccgcgcccg
gaatttgagctttcaccagccgacaccggtagtctttttcatgccgtgcttgatcgatat
ttaacccatttgcgtgatcaacaacaaaacttggccgatgttgaccccgcggcgattatg
actgctgtaccgccgatggttgccgagattgccaaacagccggggtatgaaatcctcggc
agtacgtatcgcatgacttatttgaccaagcgcttaagtcgactgctcattcaggttttg
ctcaacatgcgccagcaacagcaacgcagcggcttccgcccggtgcgcaccgagctgcag
tttggccggattggcgataccaagggactgccaggcttatcatggccgttgccgcatggg
ggtcgcgtcaatgttcgcggtaaaatcgatcggcttgatatttatcgcgaacctgatgcc
cggcgttttattattgtcgattataaaagtgggcaacgccgcttcgatgatagtgacgct
tattatggcattgccttgcaaatgctgacttacattgaagcaatgaccaacgtgacggca
gagccaccgtttgttccggcgggggcgctgtattttcacttgcaggatcctaaactcaaa
tacacgcctgaattggaaccggcacttgagcgactcaaagccttcaagtatctgggtttc
ttagtcgccgaacacggagatgagctggcggccgtggatcgtaccatttcaccggaaagt
ggcggtcgtagtgagattgccccgcttggctttaaaaaagatggcagtttcaaccagaat
cagtcaaacgtcctgactcccgaggcgttgcgggcttatttggctcacaatcaggcgctg
attatcgatgcagccacgcaaattcttgcgggggatattgcacttgagcctttccaatat
ggccagtcttccacgattgtcagtcgcagcgactatcaaagtattatgctgtttgaccct
gcaaccggttttgatcattaccatcacgtccctaagttaaagcgtaaagacgtgattgga
cgccttaccgctgacccgacacaaataccgcattctgaaaaggagcatccacagtcatga
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