Lacticaseibacillus rhamnosus GG: LRHM_2295
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Entry
LRHM_2295 CDS
T02100
Name
(GenBank) bacteriocin ABC transporter ATP-binding and permease components
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lrg
Lacticaseibacillus rhamnosus GG
Pathway
lrg02010
ABC transporters
lrg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LRHM_2295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRHM_2295
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrg01002
]
LRHM_2295
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrg02000
]
LRHM_2295
Peptidases and inhibitors [BR:
lrg01002
]
Cysteine peptidases
Family C39
LRHM_2295
Transporters [BR:
lrg02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LRHM_2295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
AAA_24
ABC_ATPase
SMC_N
AAA_22
AAA_29
Peptidase_C39_2
AAA_33
AAA_18
DUF87
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BAI42822
UniProt:
A0A809N5K4
LinkDB
All DBs
Position
complement(2456541..2458733)
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AA seq
730 aa
AA seq
DB search
MFKHTPKLGQITYYKRFYTAQVDERDCGVAALNMLLKYNGSDYSLAHLRELAKTNQDGTT
ALGIVRAAEALAFETKPVQANMQLFDLEDVPYPFIAHVLKRGELLHYYVVFKATRTSILI
GDPDPSVRMTWLSREVFEKEWSGVAIFIAPAPQYQPRKEDKGSLFAFVPMLAKQKGIIAN
IILAAVLITVISIVGSYFLQSIIDTYIPNAMRTTMGMIASGLLVAYLLQAVLTYGQNFLM
AVLGQRLAIDVILGYVRHLYELPMSFFSTRRTGEIVSRFADANKIIDALANTIMTLFLDV
WIVLILGIVLGIQNGTLFLVSLIAVPCYLVIVFAFQRPFDRLNQETMESNAILSSSIIED
LNGIETIKSLTGERVSYERVDREFLTYLKRSFSYTKADQLQQAIKGLLKLALNVVVLWIG
ASLVIANRMSLGQMLTFNALLSYFTNPLESIINLQPKLQMARVANNRLNEVYLVESEFKE
PRHLTERHLIEGPLRVRDVSFKYGFGQDVLKNINLEVPENAKYTIVGMSGSGKSTLAKLL
VGFYPVDTDKGTITFNGIPVKDINLTTLRQYIEYVPQDPFIFSGTVLENLTLGSRSDVSE
QDLTQACLAAEIAADIANLPQQWQTKLSESGSILSGGQKQRLAIARALLSPAKVLIFDES
TSSLDTITERKIVDRLLAMTDRTIIFVAHRLTIAAKTEQIVVMDHGKIVEQGDHATLLAQ
DGYYARLVHE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacacacccccaaactaggccagatcacctactacaaacgcttctacaccgca
caagttgacgagcgtgactgtggtgtggctgcgttaaacatgctgcttaaatacaatggg
tcggactattcgttagcccacttgcgcgagttagcgaagacaaatcaggatggcacgacg
gctttgggaattgttcgggccgctgaagcactagcgtttgagacgaaaccggtgcaggcg
aatatgcagttgtttgatcttgaggatgtgccttatccgtttattgcccatgtgctgaag
cgcggtgaattgcttcattactatgttgtttttaaagcaacgcgcacgagtattctgatt
ggcgatcctgacccgtcagtgcgcatgacctggctttcgcgagaggtgtttgaaaaagaa
tggtcgggtgtggccatctttattgcaccggcgccgcagtatcagccgcgtaaggaggac
aaaggcagtttgtttgcgtttgtacccatgctggctaagcaaaaaggtattatcgcgaac
attattctggccgcggtattgattacggtcattagtatcgttgggtcgtattttttgcag
tctattattgatacgtatataccgaatgccatgcggacgacgatggggatgattgctagt
ggccttttggtggcttacttgctgcaagctgtgttgacttatggccagaattttttgatg
gcggtgttggggcagcggcttgcgattgatgtcattttagggtatgtgcgccatttatat
gaattgccgatgtcgtttttttcaactcggcggaccggagagattgtgtcgcggtttgcg
gatgccaataaaattattgatgcgctggcgaatacgattatgacgttgtttttggatgtc
tggattgtcctaatattaggcattgttctagggatccaaaatgggactttgtttttagtg
tcattgattgccgtgccgtgttacttggtgattgtttttgcatttcagcggccgtttgat
cggttgaatcaagagacgatggaaagtaatgcaatcttgagttcatcgattattgaagat
ttgaatggcattgaaaccatcaagtccttgaccggcgaacgagttagctatgaacgggtt
gatcgggaatttctaacctatttgaagaggtcgtttagttacaccaaggcagatcagtta
cagcaagcgattaaaggcctgttgaagctggcgttgaacgttgtggtgttgtggattggg
gcaagtttggtgattgccaatcgaatgagtttggggcagatgctgacctttaatgcgctg
ctgtcatactttacgaatccgcttgaaagcatcatcaacctacagccaaagttacaaatg
gcgcgggttgctaacaatcgtttgaatgaggtttatctggttgaatcggaattcaaagaa
ccgcggcacttgacggagcggcatttaatcgaaggtccgttacgtgttcgggatgtttcg
tttaaatatggttttggccaagatgtgttgaaaaacatcaaccttgaagtgccggaaaat
gctaaatataccattgttggcatgagtggttctggtaagtcgacattagcaaaattatta
gttggcttttacccagttgataccgataagggaaccatcacgtttaatggcattccggtc
aaagacattaatctcacaacattacggcaatatattgaatatgtacctcaggatccattt
attttttcgggcacggtgttggagaatttgacgttaggtagccgttcggatgtttcggaa
caagacttgacgcaggcgtgtttggctgcggaaattgccgcagacatcgcaaacttaccg
cagcagtggcagaccaaattgtcagaaagcggcagcattttatcaggcggtcagaagcag
cggctggcgattgcacgggccttgttatcgccggcaaaagtactgatttttgacgaatcg
actagcagtctggataccattacagagcgaaaaattgtcgatcgcttgctggcaatgacg
gatcggaccattatttttgttgcccatcgcttaactattgcggctaaaaccgaacaaatt
gtggtgatggatcatggcaaaattgtggaacaaggtgaccatgcaacgttgttagcccaa
gacggttattacgcgcgcctggttcatgagtga
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