Lacticaseibacillus rhamnosus GG: LRHM_2364
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Entry
LRHM_2364 CDS
T02100
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lrg
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrg03016
]
LRHM_2364
Enzymes [BR:
lrg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LRHM_2364
Transfer RNA biogenesis [BR:
lrg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LRHM_2364
Prokaryotic type
LRHM_2364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAI42891
UniProt:
A0A7S7JI98
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All DBs
Position
complement(2522177..2522920)
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AA seq
247 aa
AA seq
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MTHYKVTLAYDGTNFAGYQVQPKQRTVQGVLQKALTKMAKGQPVHVDGSGRTDSGVHALG
QVISFDYPGNIPAESMLRAMNSLMPLDIEILKAEIVAADFHARYSAKGKRYRYRVARGYY
TNPFNRLYTGHYPYKLDVKRIEVALKDLVGTHDFTSFAASGGVIKDKVRTIYEATVEEDP
AANELVFEFYGNGFLYNMVRILVATALEIGNGRRDVHDFQRLFEVKDRQQARGTAPASGL
YLKEVYY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcattataaagtgacactggcttacgatggcaccaactttgccggctatcaagtt
cagcccaagcagcgaacggttcaaggtgttctgcaaaaagctctgacgaaaatggcaaaa
gggcaaccggtgcatgttgatggctcaggccggacagattcaggcgtgcacgcgctagga
caggtcattagttttgattacccgggaaatattccggctgagtcgatgttgcgggcaatg
aattcactgatgccactggatattgaaatcctaaaagctgaaattgtcgcggcggatttt
catgcgcgctattcagcgaagggaaagcgatatcggtatcgggtggcgcgtggctattat
acgaatccgtttaatcgcctttacacaggacactatccttataagttggatgtcaagcgg
attgaggttgcgttgaaagatctagttggcacgcatgacttcacgagttttgcagctagt
ggcggtgtgattaaagataaggtccgaacaatttatgaggcgacggttgaagaagatccg
gctgccaatgaattggtttttgagttttatggtaatggctttttgtacaacatggtgcgg
attttagtggcaacggctttggagattggcaacggccggcgcgatgttcatgattttcaa
cggctttttgaagttaaggataggcagcaggcaagaggtacggcccctgcttcgggattg
tacttgaaggaagtttattattga
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