Lacticaseibacillus rhamnosus GG: LGG_00006
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Entry
LGG_00006 CDS
T00987
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lrh
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrh03032
]
LGG_00006 (gyrA)
03400 DNA repair and recombination proteins [BR:
lrh03400
]
LGG_00006 (gyrA)
Enzymes [BR:
lrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LGG_00006 (gyrA)
DNA replication proteins [BR:
lrh03032
]
Prokaryotic type
DNA Topoisomerases
LGG_00006 (gyrA)
DNA repair and recombination proteins [BR:
lrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LGG_00006 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAR85901
UniProt:
A0A7S7FLU8
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All DBs
Position
6540..9152
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AA seq
870 aa
AA seq
DB search
MDDRQESRITNVNLGETMRKSFLEYAMSVIVARALPDVRDGLKPVQRRILYGMNELGVTP
DKPYKKSARIVGDVMGKYHPHGDSSIYEGLVRMAQDFSYRYMLVDGHGNFGSVDGDGAAA
MRYTEARMSKIAVEMLRDINKDTIDFQDNYDGTEKEPVVLPARFPNLLVNGATGIAVGMT
TNIPPHNLSETISALHVLMDHPDATTADLMQALPGPDFPTGGVVMGKSGIRHAYETGRGT
IVLRGKVDVQTEKSGRERIVITEIPYMVNKAKMVERIADLVHEKKIDGIVTLRDESDRDG
MRIVIDVRRDASASVILNNLYKLTPLQTGFSFNMVAIVNGAPKVLSLKQILQYYLDHQEN
VIRRRTQYDLKKAKAREHILEGLRIALDHIDEIITIIRSSETGDKAKVILMDKFNLSDKQ
SQAILDMRLVRLTGLERDKVESEYKDVEAAIADYTDILAKPERVHQIIYDELLDIQKKFG
DKRRTELLVGEVLSLEDEDLIEQEDVVITLSHNGYVKRLATSEFKTQNRGGRGIQGMNVH
DDDFVEHLISTSTHDVLLFFTNKGKVYRSKGYEIPEYSRTAKGIPIINLLGVGAGEKIQT
VINVHEGDNDDRYLFFVTQNGVVKRTPVKEFANIRSNGLIALNLKDQDELNNVILTSGQD
NILIGTHLGYSVAFKEQDVRSMGRTATGVRGIRLRDHDYVVGSDILKPDSEVFVISEKGY
GKRTAAKEYPIKGRGGKGIKTANITEKNGPLAGVTTVDGTEDILVMTDSGVMIRFNIQNV
SQTGRATLGVRLIRVDDDAKVATMAKVEPESDDPDDSSKPDQPTDPQAGPTDAHAQPADG
QYAGNADEQVNKLLDRSETDKPAPDDGDEA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgccaagaaagccggattacgaatgtgaatctcggcgaaacaatgcgtaaa
tcattccttgaatacgcgatgagtgtcattgtggcgcgggcattgcctgacgtacgtgat
ggcctcaaaccggttcagcgccggattctgtatggcatgaatgaactcggggtcacaccg
gataagccatacaagaagagtgcgcggatcgtcggggatgtcatggggaagtaccatccg
catggtgacagctcgatttatgaaggactcgtccgaatggcgcaggactttagttaccgg
tatatgctggttgacggccacgggaactttggctcggttgacggtgacggtgcggcggcg
atgcgttacaccgaagcccggatgagtaaaattgccgtcgaaatgttacgcgacatcaac
aaagacacgattgattttcaggataattacgatggcaccgaaaaagaaccggttgttttg
ccagcgcgcttcccgaatctgctggtcaacggtgcgacagggattgcggttgggatgacc
accaatattccgccgcataatctgtcggaaacgatttcggccttgcatgtgctgatggat
catcctgatgccaccaccgctgacttgatgcaggcattgccgggacccgattttccaacc
ggtggcgttgtcatgggcaagtccggtattcgccacgcatacgaaaccggtcgcggaacg
attgtgttgcgtggtaaagtcgacgttcaaactgaaaagtccgggcgcgaacggatcgtt
attaccgaaattccatacatggttaacaaagccaagatggtggaacgaattgccgatttg
gtccatgaaaagaaaattgacggcattgtcaccttgcgtgatgaatccgatcgtgatggg
atgcggattgtcattgatgtccgccgcgatgccagtgcttcggttattttgaataatctc
tacaaactgacaccgctgcaaaccggtttttccttcaacatggtggcgattgtcaatggt
gcgccaaaggtattgagcctgaaacagatcctgcaatattatctggatcaccaggaaaat
gtcattcggcggcggacgcaatatgacctgaagaaggccaaggcacgggaacatattctt
gaaggcttgcgaattgcgcttgatcatatcgatgaaatcattacgattattcgcagttcc
gaaaccggcgataaagctaaagtcatcttaatggacaagttcaatctgtccgataagcaa
agtcaggccatcctggacatgcggctggtgcggttgaccggtctggaacgtgacaaggtt
gaaagcgagtataaagatgtggaggcagccattgccgactacaccgatattctggctaaa
ccggaacgtgttcaccagattatttatgatgaattgctcgatattcaaaagaaattcggt
gacaagcgccggactgaactgctggtcggtgaagtgctgagtcttgaagatgaagatctg
attgagcaagaagatgtcgtgattaccttgagtcacaacggttacgttaagcgcttggca
accagtgaattcaagacgcaaaatcgcggtggtcgcggtattcaagggatgaacgtccat
gacgatgatttcgtcgaacacctgatttccacgtcaacccatgatgttttgctcttcttc
accaacaaaggcaaagtttaccgcagcaagggttatgagattccagaatacagccggaca
gcaaaagggatcccgatcattaacctgttaggtgttggcgcgggcgaaaagattcagaca
gtgatcaacgtccacgaaggcgacaatgatgatcgctatttattcttcgtcacccaaaac
ggtgtagttaaacggacaccggtcaaggaatttgccaatatccgcagcaacggtctgatt
gcgctcaacttgaaagatcaagatgaattgaacaatgtcattttgacgtctgggcaggat
aacatcttgatcggcacgcacttgggttacagtgtggcctttaaggaacaggatgttcgg
tcaatgggtcggacagccaccggggttcgcggcattcgccttcgtgatcacgattacgtg
gttggctccgatatccttaagccagattccgaagtctttgttatttccgaaaaaggctac
ggtaagcgcacagctgccaaggaatatccgattaagggtcgcggcggtaaagggattaag
accgcgaatattactgagaagaatggtccgctggcaggggttacgacagttgacggcacc
gaagatattctggtgatgacagactctggggtcatgattcgcttcaatatccaaaatgtg
tcgcaaaccggccgggcaacactaggcgttcggttgattcgggtcgacgatgatgccaag
gttgcaaccatggctaaggtcgaaccggaaagcgacgatccagatgacagcagcaaaccg
gatcagccaaccgatccgcaagccggaccaactgatgcacatgcgcaaccggctgacggg
cagtatgcaggcaatgccgatgaacaggttaacaaactgttagatcgttcggagactgat
aaacctgcacctgatgatggcgatgaagcctaa
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