Lacticaseibacillus rhamnosus GG: LGG_00671
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Entry
LGG_00671 CDS
T00987
Symbol
sbcC
Name
(GenBank) DNA repair ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lrh
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrh03400
]
LGG_00671 (sbcC)
DNA repair and recombination proteins [BR:
lrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LGG_00671 (sbcC)
Archaeal homologous recombinant proteins
LGG_00671 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
ABC_tran
DUF5906
Rad17
AAA_18
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAR86566
UniProt:
A0A809MUG4
LinkDB
All DBs
Position
683117..686248
Genome browser
AA seq
1043 aa
AA seq
DB search
MKLKQLHMQFFGPYADETVNFEDFRTTPLFLISGPTGSGKTTIFDALVYALYGETSGERD
GMQMRSNFASHHDLTKITLTFDHDGKHYRVVRQPQQIQQKKRGDGLTEVKAKAILAIADA
DKQVAEYTKKNQVQSQLDAILHLDAKQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQTAMQAQTKQQGAAIQDQERMLNLLTSQFEFATPPSDNATMADKLALMRQEVTQ
QATTVTNLQTMADQRHQCYQTAQTALQTGKQLAQAFEDRKQTAAALAQLAEQKQTQQDRL
KLMERLTWVQEHEAAEQRVQRAARDLTIAKTQLVQTQTAMKTAQQAMDQAQTKLNDLQQQ
DSAIEAKKTQLDQLQSVKQQLVAIADQEKQVAQQTAAVAQAEAASVQAQKKLANDQKKLD
QYQTELNQLAVSDLADRAADHKQLVAALKPVAANYQDAHAEAEQLASKLTDTKTLLIQAT
NVSQSAEQQLNQLQQTQIRQQIAQLAAKLTPGTPCPVCGSVEHPHPAVALDEPLVTEAEV
KQATQARQQAAAKETTLQAQVSNLEEQHAAATKKSNVAKNSFWAQVSSSIDAVSPQSEQS
DVLKQLAILEEKAQAAVQALSAAQIRQDALKKAITVGQTVVSADDQEIQATQSALNTAKI
EAAKANSVLTTMKASLPAGTTDLKTVTEQSHVLTEAIKTYQEQLKTAQRQLSEFDRQLAG
LHADERHATDQIATLKKEHQEAEDGFLSAVTDYFGSDGVAKFAAMREQLGQLPLLQQQTQ
RYKDDVLKQQTLLAAANKTIGNQPQPALDQLEAQASAAEAEATKAQTAFIEAKQKHDTAQ
KLLEQAADILAANQTALAAYADLQTLTAVMNGNGPKKLSLERYVLQAYLQDVLDVANTRL
QVLSNQRYQFVLHTDLGTQKIHSGLEIDVYDDQVGERRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDTNSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVQPAGTGRSRIKVMHMASA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacttaaacaattacacatgcagtttttcggaccctatgcagatgaaacagttaat
tttgaagattttcgcacgaccccgctattcttaatcagcggaccgactggcagcgggaaa
accacgatttttgatgccttagtgtatgcgttatacggcgagacgtcaggggaacgcgat
ggcatgcagatgcggtccaactttgccagccaccatgatctgactaaaattacgttaact
tttgatcatgacggtaaacattatcgggtagtgcgccagccgcaacagatacagcaaaaa
aaacgtggtgatggactgactgaggtcaaagcaaaggccatattggcgattgcagatgct
gataagcaagtggccgaatataccaaaaaaaatcaggtccaaagccagcttgatgcaatt
ttacatcttgatgccaagcaatttcggcaaattgttctgctgcctcaaggagactttcgg
cgttttctagatgccgacagtaatgccaaagaagatttacttcgggatttatttgggacc
cagttgattcaacgctggcaaacagctatgcaagcacaaaccaagcagcagggagccgcg
attcaggatcaggaacggatgctgaatttgctgacgtcacagtttgaatttgccacgccg
ccatctgacaacgcgacgatggctgacaaattggccttgatgcgtcaggaagtaacgcag
caagcaacaaccgtcaccaacctgcaaaccatggcagaccaacgccaccagtgctatcag
acggcccagacagctcttcagaccggcaagcagctggcacaagcatttgaagatcgaaaa
caaactgctgcggctttggcacaacttgctgaacagaagcaaacacagcaagaccgtctt
aagttaatggaacggttaacctgggttcaagaacacgaggcagctgagcaacgggtgcaa
agagcagctcgtgatttaacgatagccaagacgcaacttgtacaaacccaaacggcaatg
aaaaccgctcagcaggccatggatcaggcccaaacgaaattaaatgatttacagcagcag
gattcggccattgaagccaaaaagacgcaacttgatcaattgcaatcggttaaacagcaa
ctcgttgcaattgcggatcaagaaaaacaagtagcccaacaaaccgccgcagttgcacag
gcagaagcagcgtctgtacaggcgcaaaaaaaattggcaaatgatcagaaaaaacttgat
caatatcaaaccgagttgaaccaactagcagtgtcagatttggcagatcgagcagctgac
cataaacaattagtggcagcgctgaaaccggtagccgctaattatcaagatgcgcacgct
gaagctgaacaacttgccagcaagctaacggacacaaagacgttgctgattcaggcgaca
aatgtgagtcaatctgccgagcagcagttgaatcaattgcaacagacccagatccgacaa
caaattgcccaattggcggctaagttgacgcccgggaccccttgcccggtttgcggcagt
gtcgagcatccacacccggctgtagccttggatgaaccgctggtgactgaggctgaggtg
aaacaggctacccaagcacgccagcaagcagcggcaaaagaaacgactttgcaagcccag
gtatccaacctagaagaacagcacgctgccgctaccaaaaagtcaaatgtagcaaagaac
agtttttgggcgcaggtgagctcaagcatagatgcagtgagtccccaaagcgaacagtca
gatgttttgaaacagctggcaatacttgaagaaaaagcacaggctgcagtccaagcgtta
tccgccgctcagatcaggcaggatgcgctgaaaaaagcaataacagttggtcaaactgtt
gtgagcgcagatgatcaggaaattcaagcaacccaaagtgcgcttaatacagcgaagatt
gaggcggcaaaagctaacagtgtactgacgaccatgaaagcaagtttacctgcaggcacg
actgatcttaagacagtaaccgaacagtcgcatgtcttgactgaagcaatcaagacttac
caggaacaattaaaaacggcgcagcgtcagttaagtgagttcgatcgccagttagcaggc
ttacatgcagatgaacgccatgctactgaccagatcgcgacactgaaaaaagagcaccag
gaagcagaagatggctttttatctgcagtaactgattattttggttcggatggtgtcgca
aaatttgctgccatgcgcgagcaattagggcaattaccacttttgcagcaacaaacgcag
cgttataaggatgacgttttaaagcagcagacattactggcagccgctaacaaaacgatt
ggcaatcaaccgcaacctgcccttgatcagcttgaggctcaagcaagtgcagctgaagca
gaggcaacaaaagcacaaactgccttcattgaagcaaagcagaaacatgatacggcccaa
aaattgcttgaacaggccgcagatattttagcggccaatcaaactgctttggctgcctat
gccgacttgcagacactgaccgccgttatgaacggcaatggtcccaagaagcttagtttg
gaacgttacgttttacaagcctatcttcaggatgttttggatgttgctaacactcgcttg
caagtgctttccaaccagcgttaccaatttgtgttgcatacggacttgggaactcaaaag
atccattcaggtctggaaattgatgtatacgatgatcaggtgggtgaacgtcgcgcagtt
caaacactgtctggtggtgaaagctttattgctgcgttgagccttgcattggcactgggc
gaggtgattcagcaagaaagtggtggcatcaatattgatgctttgtttgttgatgaaggc
ttcgggagtttggataccaatagccttgatgtggcaatgaacgcgcttgaatcgctggaa
ggcgaatcgcgattgatcgggattatttcgcacgtgacggaattaagggataatattccc
gatcagttgcaggtgcagccagcagggacagggcggagtcggattaaggtgatgcatatg
gcgtcggcgtaa
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integrated database retrieval system
