Lacticaseibacillus rhamnosus GG: LGG_00924
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Entry
LGG_00924 CDS
T00987
Symbol
uvrA
Name
(GenBank) Excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lrh
Lacticaseibacillus rhamnosus GG
Pathway
lrh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGG_00924 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrh03400
]
LGG_00924 (uvrA)
DNA repair and recombination proteins [BR:
lrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGG_00924 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGG_00924 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
AAA_33
nSTAND1
AAA_23
nSTAND3
AAA_21
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
NB-ARC
BCA_ABC_TP_C
SLFN-g3_helicase
cobW
RNA_helicase
Septin
FtsK_SpoIIIE
MMR_HSR1
T2SSE
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAR86819
UniProt:
A0A7S7FP39
LinkDB
All DBs
Position
929838..932732
Genome browser
AA seq
964 aa
AA seq
DB search
MANDKIVIHGARAHNLKNIDVTIPRNKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDGTPITSQSVEQMVDRVLALPEKSRIQILSPIVRRKKGSHKKVFAKIMREGYVRMR
VDGEVMDATADYELDKNKAHDIDIVIDRIVVKPEARSRLFDSFEAALRLSEGYANVDVIG
GDTLRFSEHFACPICGFTIGEMEPRLFSFNAPFGACPECDGLGVKLTVDMDLVVPDPSMT
LAQGAIAPWNPISSQYYPELLAQAATAFKVRMDVPFKKLTKRERNVVLNGSDGKPFHFHY
ENDFGGVRDVDVPFEGVLTNISRRYAETNSDFTRQQMRSYMTALPCPVCHGKRLNRQALA
VKISGRDIAEVSDLAIKDALPFFKQIHLSEAETVIAQPIVKEVVDRLTFLVNVGLGYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIASLKKMRDLGNT
LIVVEHDEDTMRAADYLIDVGPGAGEHGGRIMASGTPKQVARVRKSITGQYLSGRKFIPV
PLKRRPGNGKVIRLEGASDHNLKHINVDFPLGKFIVVSGVSGSGKSTLVNSILRRALAQK
LNHNSEKPGPYDKILGYKNIEKLINIDQSPIGRTPRSNPATYTSVFDDIRGLFAETNEAK
LRGYKKGRFSFNIKGGRCENCKGDGIIKIEMNFLPDVYVPCEVCHGKRYNSETLEVTYKG
KNIAEVLDMTVEEATAFFKNIPKIRRKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAS
ELQKLSTGKNFYILDEPTTGLHTDDIKRLLEILERLVDEGNTVLVIEHNLDVVKTADWVI
DLGPEGGDGGGQVIATGTPEEVAEVADSYTGQYLKPVLIRDTKRTKEAAAGSSKQAKAAK
TSTK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgataaaattgtaatccacggggctcgggcccataacttaaagaatattgat
gtgacgattccgcgcaataagcttgtggtcatgacgggcctttcaggttccggtaagtcg
agtctggcgtttgatacgttatatgcagaaggccagcgccgttatgtcgaaagcttatct
gcttatgcacgccagtttcttggtcaaatggagaaaccggatgttgattcgattgatggt
ctcagtccggcaatttcgattgatcaaaagacgacttccaagaatccacgctcgacagtt
ggaacggtcactgaaatcaatgactacttgcgactgttgtgggcgcgggtcggtcatccg
atttgtcctaacgatgggacgccgattaccagtcaaagtgttgaacaaatggtggaccgc
gtcttggctttgccggaaaagagccgcattcagattctgtcaccgattgtgcggcggaaa
aaaggcagccataagaaagtctttgccaaaattatgcgtgaagggtatgtccggatgcgc
gttgacggtgaagtcatggatgccacagcggactatgaactagacaaaaacaaagcccat
gatattgatatcgtgattgatcggattgtggtgaagccagaagcccgcagtcggttattt
gactcttttgaagcggcgttgcggctttcggaaggatacgctaatgttgacgtcattggt
ggcgatacactgcgtttttcggaacattttgcctgcccgatttgcgggtttacgattggt
gaaatggagccgcggttattttcgtttaatgcgccatttggagcgtgcccggaatgtgac
gggctgggtgtgaagttgactgttgacatggatctggttgtaccggatccaagtatgact
ttagctcaaggtgccattgccccatggaatccgattagttcgcaatattacccggaactg
ttggcacaagcggcaactgcctttaaggtgcgaatggatgtaccgtttaaaaaactaacc
aagcgcgaacggaatgttgttctcaatggcagcgatggcaagccattccactttcattat
gaaaatgacttcggcggtgttcgtgatgttgatgtaccgtttgaaggcgttttgaccaac
atttcccggcgttatgccgagacaaatagtgacttcacccggcaacagatgcgcagttat
atgacggccttgccttgtccggtttgtcatgggaaacggctcaatcgacaggcactcgcg
gtcaagatctctggacgtgacatcgctgaagtatctgacttggccattaaggatgcgctg
ccgtttttcaagcaaatacatttgagcgaagccgagaccgtgattgctcagccaattgtc
aaagaagtggtggatcggttaacttttcttgtcaacgtgggcctcggctatttgacctta
agtcgaagcgcggggacgctgtcaggcggtgaagcgcaacgaattcgattggccacacaa
atcggttctaatctaagtggtgtgatgtatgtgcttgacgagccatctattgggttgcat
cagcgcgacaacgaccgtttaattgcctcgctgaaaaaaatgcgtgatttaggcaacacg
ctaatcgttgtggagcacgatgaagacacgatgcgtgcagccgattatctaattgatgta
ggtcctggcgctggtgagcatggtggccgaatcatggcatcaggaacccccaagcaagtc
gcccgcgtgcgtaaatcaattaccggccaatatttatcgggtcgcaagtttatcccggta
cccttaaaacgacggccgggcaatggcaaagtgattcggctggaaggtgcgtctgatcac
aacttgaagcatatcaatgtcgattttcctttaggtaagttcattgttgtttccggcgtc
tccggatcaggtaaatcgacgctggttaattcgattttgcggcgggcactggcgcaaaag
ttaaaccacaattccgaaaaacccgggccatatgataagattctcggctataaaaatatc
gagaaactcatcaacattgaccagagtccgattgggcgtacaccgcggagtaatccggca
acgtataccagtgtttttgatgacattcgcggtttgtttgcggaaaccaatgaagccaag
ttgcggggttataaaaagggacggttcagcttcaatattaaaggcggacgctgcgagaat
tgtaaaggcgacggcatcatcaagattgaaatgaacttcctgcctgatgtttatgttccg
tgtgaagtctgtcatggcaaacgatataattccgaaaccctggaagtcacttacaagggc
aagaatattgctgaagttctggatatgaccgttgaagaagcaaccgcattctttaaaaac
attcctaagattcgccgtaagttacagacgattgtcgacgtcggattgggttatgtgaag
cttggtcagagcgccaccactttatccggcggggaagcacagcggatgaagttggcaagt
gaattgcaaaaactatcaacgggtaaaaatttctacattctcgatgaaccaacaacgggg
ttgcacaccgatgatattaagcggttgttggagatcctcgaacggctggtggatgaaggt
aacacagtcttggtgatcgagcataatctggatgtcgttaaaacggctgattgggtcatt
gacctaggaccggaaggcggagatggcggtggtcaagtgattgctaccggtacacctgaa
gaagttgccgaggtggctgacagttacaccggccagtaccttaaaccggttttaattcgt
gataccaaacggacaaaagaagccgcggccggttcgtctaagcaggcaaaagcggctaaa
acatcgacgaaatag
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