Lacticaseibacillus rhamnosus GG: LGG_01336
Help
Entry
LGG_01336 CDS
T00987
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lrh
Lacticaseibacillus rhamnosus GG
Pathway
lrh03030
DNA replication
lrh03430
Mismatch repair
lrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGG_01336 (holA)
03430 Mismatch repair
LGG_01336 (holA)
03440 Homologous recombination
LGG_01336 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrh03032
]
LGG_01336 (holA)
03400 DNA repair and recombination proteins [BR:
lrh03400
]
LGG_01336 (holA)
Enzymes [BR:
lrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGG_01336 (holA)
DNA replication proteins [BR:
lrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGG_01336 (holA)
DNA repair and recombination proteins [BR:
lrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGG_01336 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_gamma3
GspL_M
AAA_lid_RFC1
Spb1_C
Motif
Other DBs
NCBI-ProteinID:
CAR87231
UniProt:
A0A7S7FNU6
LinkDB
All DBs
Position
1336440..1337501
Genome browser
AA seq
353 aa
AA seq
DB search
MQVRDFIKHLKNGERPPLTLILGEEQALRQQAQQALANLIPEDQKAMNFGRYDMHQTPVG
VALDDATSIPFFGEYREVVIDDPYFLTGEKSTDKIEHDLTGLQAYFDNPVPSTMMVLIAP
YKKLDERKRLTKALKKAALIVDAAPLDERSARMALAQIFKQHQVDIQPPALDALVQRTNG
QYSVMMGEVRKLLTYASDGSPLTVAAVSALVPKQLNDRVFDLVTDVLRQNAADALALYRD
LLAQREEPIRLNALMLGQFRLLIQVKLLAQKGYGQGDIAATLKAHPYRVKLALRQVGRLP
YHQLAQAYSGLVDTETAMKTGTIDKALAFELFMLKYTGQASAHRKGKYTASRS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccgtgattttatcaaacatcttaaaaatggcgaacgaccgccgctgacatta
attcttggcgaggagcaggctttacggcaacaggctcaacaagcgctggctaatttgatt
cctgaagaccaaaaggccatgaattttggccgttatgacatgcatcaaactccagtgggc
gttgccttggatgatgcgacttcaattccttttttcggcgaataccgcgaagttgtgatt
gacgatccttactttttaaccggcgaaaaaagtaccgataagattgaacatgatctcacc
ggactgcaggcttattttgacaatccggttccgtcaacgatgatggtgttaatcgcaccg
tataaaaaacttgatgaacgtaaacggctgacgaaagctttgaagaaggcagctttgatt
gttgatgctgcgccactggatgaacggtcagcgcgaatggcattggcacaaatcttcaag
caacatcaagtcgatattcagccaccagcactcgatgcgcttgttcagcgaacgaacgga
cagtattcggtcatgatgggcgaagtccggaagcttctgacgtatgcaagtgatggtagt
ccattaaccgttgctgcggtatcggcattggtccccaagcagcttaatgatcgggttttt
gatctggtaacggatgtgttacgtcaaaatgccgcggatgctttggcactttatcgtgat
ctgcttgcacaacgcgaagaaccgattcggctcaatgcgttaatgctaggccaatttcga
cttttaattcaggttaagttattagcacaaaaaggttacggtcaaggtgatattgctgct
acgctcaaggcccatccgtaccgagtcaaattagcgttacggcaggttggtcgcttgcct
tatcaccaactggcccaggcttatagtgggctggtggatactgaaaccgcgatgaagacg
ggaacgattgataaggcactggcctttgaactgttcatgctgaagtacacaggtcaagcg
tcagcgcatcggaaggggaagtatacggcttcacgctcctaa
DBGET
integrated database retrieval system
