Lacticaseibacillus rhamnosus GG: LGG_01488
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Entry
LGG_01488 CDS
T00987
Symbol
comEB
Name
(GenBank) CMP/dCMP deaminase, zinc-binding protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lrh
Lacticaseibacillus rhamnosus GG
Pathway
lrh00240
Pyrimidine metabolism
lrh01100
Metabolic pathways
lrh01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LGG_01488 (comEB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lrh02044
]
LGG_01488 (comEB)
Enzymes [BR:
lrh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LGG_01488 (comEB)
Secretion system [BR:
lrh02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LGG_01488 (comEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
SNAD4
Bd3614-deam
APOBEC2
APOBEC_N
NAD1
HUTI_composite_bact
APOBEC3
Motif
Other DBs
NCBI-ProteinID:
CAR87383
UniProt:
A0A7S7FP93
LinkDB
All DBs
Position
complement(1493697..1494161)
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AA seq
154 aa
AA seq
DB search
MTDAIMPSKRTVHRESWDHYFLELAKKVSERSTCERATVGAVLVQEHRIIATGYNGAISG
DPHCDEAGHLMRDGHCIRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAG
IKRVVYAHDYRNDPYGETLLAQHHVAVVHLEQQA
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
ttgacagatgccattatgccatccaagcgtacggttcaccgtgaaagctgggatcattat
tttcttgaactcgccaaaaaggtttcagaacgttcaacttgtgagcgcgcaacggtgggg
gcagttttggttcaggaacatcggatcattgcgaccggttataacggcgcgattagtggt
gatccgcattgtgatgaggccggtcatttaatgcgtgatggtcactgcattcggaccata
catgccgaaatgaatgccatcattcaatgtgcggctaatggggtcagtacccatggcgca
accgtctacgttaactttttcccatgtctgaattgtacaaaggccttgatccaggctggc
attaagcgtgttgtgtatgcgcatgactatcgcaatgatccgtatggcgaaacgttattg
gcacagcaccatgtggccgtggttcatctagaacagcaagcttag
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