Lacticaseibacillus rhamnosus GG: LGG_01781
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Entry
LGG_01781 CDS
T00987
Symbol
cbf
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lrh
Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrh03019
]
LGG_01781 (cbf)
Messenger RNA biogenesis [BR:
lrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LGG_01781 (cbf)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CAR87676
UniProt:
A0A809MYM1
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All DBs
Position
complement(1809213..1810181)
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AA seq
322 aa
AA seq
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MAKRLFDYHNEEDVRLPVLIKSAEVRVAKNGKKFIAMIFQDNSGHISGKFWDATENDIAQ
FKAGEVVQLSGKRELYQGNPQIKIYSMRLATQEEGNDPRTFVERAPEAPNAMEEELNSFI
FEITNANWNRIVRKLIQDHKKAFFSYPAAKSNHHAFAGGLAFHTLSILRLAKNVVAQYSS
LNKSLLYAGAILHDLGKTIELSGPISTEYTVPGNLIGHIVLIDEQIVLAAHQLKIDINSE
DMLLLRHVVLAHHGLLEYGSPVRPQLLEAQVLHDLDEMDASINMMTTAYQHVDPGTFTER
LFGMDNRRFYRPTNGQTYPDPH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacggctttttgattaccataatgaagaagatgtgcgacttcctgtattaatt
aaatcagcggaagtccgggtagcaaaaaatggcaagaaatttattgccatgatttttcaa
gacaattccggccatatttcgggtaaattctgggatgcaaccgaaaatgatattgcccag
ttcaaagccggcgaagtggtgcagctgtcaggaaagcgggaattgtatcaaggcaacccg
cagatcaagatttactcaatgcgtttggcaacccaagaagaaggaaatgatccgcgtacc
ttcgttgaacgtgcaccggaagcgcccaatgccatggaagaagagctgaacagtttcatt
ttcgagattactaatgccaattggaatcgaatcgtccgtaaactgattcaagatcataaa
aaggcattcttcagttatcctgctgccaagtcgaatcatcatgcctttgctggtgggctt
gcttttcataccctgagcattttacgcttggccaaaaatgtggttgcccagtattcaagt
ttgaacaagagcttgctttatgcgggtgcgattttacatgacttgggcaagacgattgaa
ttaagtggtccgatttcaactgaatacacagtacccgggaatctgattgggcatattgtt
ctgatcgatgaacaaattgtgttggcagcccatcaactaaagatcgatattaatagtgag
gatatgctattgctgcggcatgttgtattagcgcaccatggtttattggaatatggctcg
ccggtgcggccgcaactacttgaagcccaggtgttgcacgatttggacgaaatggatgcc
tcaatcaacatgatgacgactgcctaccaacatgtcgatccaggcacctttactgaacga
ctctttggcatggacaatcggcgtttctaccggccgacaaatggtcaaacatatccggat
ccgcactaa
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