Leminorella richardii: NCTC12151_00678
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Entry
NCTC12151_00678 CDS
T05503
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lri
Leminorella richardii
Pathway
lri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12151_00678 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lri03400
]
NCTC12151_00678 (recD)
Enzymes [BR:
lri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC12151_00678 (recD)
DNA repair and recombination proteins [BR:
lri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12151_00678 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_16
UvrD_C
AAA_28
FtsK_SpoIIIE
T2SSE
Mg_chelatase
AAA_33
MukB
AAA
DO-GTPase1
DUF6511
CbiA
Motif
Other DBs
NCBI-ProteinID:
SQI36275
UniProt:
A0A2X4X988
LinkDB
All DBs
Position
1:704356..706230
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AA seq
624 aa
AA seq
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MLTLLTKAADAGLFRPLDIQLARLLAGDSGPSMALLVAKLSAESGDGHVCLPLASLNKET
LFPGRHSEMAEALWQAAGCPTVADFLQVLSCSSAVGDGTQATPLVLDGERLYLHRMWQDE
GKIADFLLKSTSKGEVDEVQRLRRILDDLFPPVSDGIDWQKVAAAVAATRGVSVISGGPG
TGKTTTVARLLAALLSLDDTQTLRIALAAPTGKAAARLTESLAAASRDLPLTQAQRDRLP
TEASTLHRLLGMRFSRSQRRYGAENPLHLDVLIVDEASMVDLPMMAHLVGALPPQARLIL
LGDRDQLASVEAGAVLGDVCRFAELGYSATRAAQLSALTGYEIAEGESSSVSVRDSLCLL
KKSYRFDAHSGIGRLAQSVNQGDGRGALACFGQEFEDLAWLSSGDAQDYQSLLDVCIEGY
SDYLAATAEPERDAKDILARFNRFRLLCALREGPFGVEGLNERIELMLQRRGLIERPLGA
AGLWYVGRPVMISRNDASLGLFNGDIGIAFYSEGGELRVHFQLPDGSVKSVTPSRLPSCE
TAYVMTVHKSQGSEFEHTALVLPEQYTPLLSRELVYTAITRARNRLTLFAKQSVLLSAIA
TPTERRSGLAERLLKGVAGKNTTD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgctgacactattaaccaaggcggctgatgcaggtctgttcaggccgctggacattcag
ctggcgaggctattggcaggtgatagcgggccaagcatggctctgctggtggccaaactc
agcgcagagtcgggagatggtcacgtttgcctgcctcttgcttcgcttaataaagagaca
ctgtttcccggcaggcatagcgaaatggctgaggcgctgtggcaggcggcaggatgccca
acggtagccgattttttacaggtgctttcttgttcttccgcagtgggtgacggcactcag
gcgacgccgctggtgctggatggggagcgcctctatctgcatcgaatgtggcaagacgag
ggaaagattgctgactttctgttgaagagtaccagtaaaggcgaagtcgatgaggtacag
cgactgcgccgcattcttgacgatctttttcctcctgtttctgacggcattgactggcaa
aaggtcgccgctgcagtagcggcaacgcgaggcgtgtcggtgatctccggcgggccggga
acggggaaaaccacaacggtagcgcgcctgctggcggcgctgctgtctcttgatgacaca
cagactttgcgcattgcgctggcggcaccgaccggaaaggctgcggccagattaacggag
tcgctggccgcggccagccgagacttgccgctgactcaggcgcagcgagacaggctgccg
acagaggcgtcaacgctgcatcgcctgcttggtatgcgctttagccgctcacagcggcga
tatggtgcagagaatcctcttcatctggacgtgctgattgtcgatgaagcgtcaatggtg
gatctgccgatgatggcgcatttggttggtgctctgcctcctcaggctaggttgatcctg
ctaggagatcgcgatcagctggcatcagtagaggcgggagcggtgctcggagacgtgtgt
cggtttgctgaactgggctatagtgcgacaagagccgctcagcttagtgcattaacggga
tacgagattgctgaaggtgaatcttcatcagtctcggtgcgcgatagcctttgcctgttg
aaaaagagctaccgttttgacgctcactctggcattggtcgcctggcgcagtcagtcaat
cagggggatgggcgcggcgcgttggcctgcttcgggcaagagttcgaggacttggcgtgg
ctctcgtcgggtgatgcgcaagactaccagtctctgttggacgtttgtattgaaggctac
agtgactatttggcagcaacagcggagcctgaaagggacgctaaggacattttggcgcgc
tttaaccggtttcgcctgctgtgtgctctgcgcgaggggcctttcggcgtggaggggctt
aatgaacgcattgagctgatgctccagcggcgcgggcttatcgagcgtccactaggcgct
gccgggctgtggtatgtcggccgcccggtaatgataagccgcaacgatgcttcacttggg
ctgtttaacggcgatatcggcattgctttttacagcgagggcggtgagctgagggttcat
tttcagcttccggacggttcggttaaatccgtaacgccgagtcggcttccgtcctgtgaa
acggcctacgtgatgacagtgcataagtcgcagggctctgagtttgagcatacggcgctg
gtgctgcctgagcagtacacgccgttgctaagtcgggaactggtttatacggcgattacc
cgagcaagaaatcggctgacgctgtttgccaaacagtctgtgctgctgtcggccattgcg
acgccgaccgaaaggcgaagcggtctggctgaacggctgctaaagggcgtggcgggtaaa
aacacgacggactga
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